Species & Dataset
  • Arabidopsis thaliana

  • Common name: Thale cress, Mouse-ear cress

  • Family: Brassicaceae

Foliar ozone injury
Arabidopsis_injury.png
Experiment
  • Cultivar: Arabidopsis thaliana (ecotype Ws-0)

  • Tissue: Rosettes

  • Ozone concentration: 30 nL L-1 (Control)

  • 300 nL L-1 (Treatment)

  • Ozone exposure: 6 hours

  • Sampling time: 1 and 4 hours after initiation of ozone treatment,

  • 2, 6, and 18 hours after the end of ozone treatment

  • Platform: Microarray

  • Year of study: 2006

  • Location: USA

Title: Analysis of oxidative signaling induced by ozone in Arabidopsis thaliana

 

Summary: We are using acute ozone as an elicitor of endogenous reactive oxygen species (ROS) to understand oxidative signalling in Arabidopsis. Temporal patterns of ROS following a 6 h exposure to 300 nL L-1 of ozone in ozone-sensitive Wassilewskija (Ws-0) ecotype showed a biphasic ROS burst with a smaller peak at 4 h and a larger peak at 16 h. This was accompanied by a nitric oxide (NO) burst that peaked at 9 h. An analysis of antioxidant levels showed that both ascorbate (AsA) and glutathione (GSH) were at their lowest levels, when ROS levels were high in ozone-stressed plants. Whole genome expression profiling analysis at 1, 4, 8, 12 and 24 h after initiation of ozone treatment identified 371 differentially expressed genes. Early induction of proteolysis and hormone-responsive genes indicated that an oxidative cell death pathway was triggered rapidly. Downregulation of genes involved in carbon utilization, energy pathways and signalling suggested an inefficient defense response. Comparisons with other large-scale expression profiling studies indicated some overlap between genes induced by ethylene and ozone, and a significant overlap between genes repressed by ozone and methyl jasmonate treatment. Further, analysis of cis elements in the promoters of ozone-responsive genes also supports the view that phytohormones play a significant role in ozone-induced cell death.

 

Data repository: http://www.ag.arizona.edu/microarray/

Reference: Mahalingam, R., Jambunathan, N., Gunjan, S.K., Faustin, E., Weng, H.U.A. and Ayoubi, P., 2006. Analysis of oxidative signalling induced by ozone in Arabidopsis thaliana. Plant, cell & environment, 29(7), pp.1357-1371.

P-values

Log 2 ratios Ozone/control

Gene ID
1hr
4hr
8hr
12hr
24hr
1hr
4hr
8hr
12hr
24hr
Functional annotation
D64139
1.9
1.5
2.6
1.4
1.3
0.048
0.12
0.016
0.298
0.147
LEA protein putative protein id At3g22500.1
F14320
-0.7
-1.2
-2.8
-1.9
-0.5
0.496
0.164
0.008
0.184
0.331
unknown protein protein id At1g55890.1
F20116
2.5
1.8
2.3
1.5
1.2
0.018
0.065
0.006
0.24
0.132
No Hits found!
M90509
0.2
0.4
1.2
0.9
1.2
0.868
0.711
0.025
0.286
0.059
glycosyl hydrolase family 17 protein id At3g57260.1
N65439
1.1
1.5
-1.3
0.2
0.8
0.678
0.053
0.315
0.729
0.169
b/t RING finger - like protein protein id At3g54360.1 and T12E18.70 protein id At3g54380
T21937
-0.7
-0.8
-1.1
-1.2
-1
0.208
0.194
0.025
0.184
0.122
CONSTANS B-box zinc finger family protein protein id At5g24930.1
T23013
-1.6
-0.5
-0.1
-0.5
0.3
0.059
0.503
0.943
0.702
0.551
pseudogene unknown protein
U49398
2.3
2
2.4
0.8
1
0.019
0.034
0.014
0.282
0.108
sterol delta7 reductase protein id At1g50430.1
U63373
-2.1
-1.5
-2.1
-0.4
-0.2
0.397
0.165
0.021
0.423
0.884
aromatic rich glycoprotein putative protein id At1g70370.1
U78721
0.5
0.6
1.1
1
1.4
0.575
0.242
0.016
0.214
0.059
hypothetical protein protein id At2g33690.1
U97021
1
1
2.4
2
2
0.681
0.157
0.016
0.195
0.06
E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At2) protein id At5g42190.1
X03908
-0.8
-1.6
-0.3
-1
-0.8
0.458
0.038
0.728
0.296
0.16
light-harvesting chlorophyll a/b binding protein protein id At1g29930.1
X13611
-0.2
-1.1
-2.3
-1.5
-1
0.819
0.05
0.004
0.168
0.073
ribulose-bisphosphate carboxylase small unit putative protein id At1g67090.1
X68042
0.5
1.8
2.2
2.1
2.4
0.848
0.221
0.017
0.195
0.188
dehydrin RAB18-like protein (sp|P30185)
X97488
0.1
-0.2
-0.7
-2.1
-0.8
0.919
0.674
0.371
0.16
0.223
transcriptional regulator protein putative protein id At3g26640.1
xxxx
0.3
0.4
-1.4
0
1.9
0.123
0.086
0.029
0.214
0.108
MAP kinase kinase 5 protein id At3g21220.1
Y07694
-0.8
-0.7
-1.9
-1.6
-1.1
0.181
0.399
0.019
0.203
0.094
homeobox-leucine zipper protein Athb-4 protein id At2g44910.1
Y09582
-0.9
-1.9
-2
-1.8
-1.6
0.208
0.057
0.01
0.16
0.053
calnexin - like protein protein id At5g61790.1
Z18242
1
0.9
-0.4
2.5
0.2
0.405
0.186
0.873
0.162
0.573
acyl-(acyl carrier protein) thioesterase protein id At3g25110.1
Z36912
0.6
0.4
1.9
1.4
1.5
0.394
0.856
0.011
0.367
0.059
dTDP-glucose 4-6-dehydratase homolog D18 protein id At3g62830.1
Z49239
-0.7
-1.4
-2.5
-1
-0.9
0.445
0.086
0.028
0.261
0.11
dTDP-glucose 4-6-dehydratase homolog D18 protein
AL163815
-1.7
-1.8
-3
-2.5
-1.8
0.215
0.039
0.006
0.174
0.059
putative protein protein id At5g14310.1
AL163817
-0.8
-1.7
-2.8
-1.7
-1.4
0.326
0.075
0.02
0.162
0.098
putative protein protein id At3g63390.1
AL163818
-1.6
-2.3
-3.4
-0.9
-1.1
0.068
0.029
0.006
0.219
0.121
glycine-rich protein GRP14 protein id At5g07510.1
AL163912
2.5
0.2
2.9
1.5
2.1
0.017
0.124
0.021
0.236
0.127
glucosyltransferase-like protein protein id At5g12890
AL353013
0.1
0.5
1.6
0.1
1.7
0.461
0.171
0.031
0.195
0.107
embryogenic callus protein - like protein id At5g09740.1
AL353994
0.3
1
1.7
1.4
1.4
0.431
0.091
0.009
0.227
0.059
bromodomain protein - like protein id At5g10550.1
AL353995
0
0.3
1.7
1.3
1.3
0.192
0.065
0.008
0.184
0.06
Epsin-N-terminal homology containing protein id At5g10410.1
AL353995
-1.3
-2.5
-1
-0.2
-1.4
0.192
0.065
0.008
0.184
0.06
kinesin-related protein protein id At5g10470.1
AL353995
0
-0.5
-1.4
-1
-0.2
0.192
0.065
0.008
0.184
0.06
putative protein protein id At5g08210.1
AL357612
-0.1
-0.5
-1.2
-0.6
-1
0.507
0.319
0.026
0.25
0.114
bHLH protein protein id At3g56770.1
AL390921
1
0.3
1.9
0.6
1.2
0.352
0.394
0.014
0.201
0.169
glutamine-rich protein protein id At5g17510.1
AL391150
-0.4
0.3
1.6
1.3
0.5
0.723
0.485
0.029
0.199
0.355
putative protein protein id At5g17580.1
AL391151
2.2
2.2
2.1
1.4
1.7
0.034
0.056
0.016
0.225
0.065
putative protein protein id At5g12350.1
AL592312
0.5
0.9
1.7
1.5
2
0.271
0.3
0.091
0.229
0.055
putative protein protein id At5g52500.1
AP000378
1.7
0.3
2
0.5
1
0.175
0.77
0.025
0.526
0.3
hypothetical protein protein id At3g12880.1
AP000385
0.2
1.1
2.4
1.6
1.4
0.829
0.296
0.104
0.16
0.065
b/t hypothetical protein protein id At3g28155.1 and non-LTR reverse transcriptase putative protein id At3g28160.1
AP000415
-0.8
-2.8
-2.4
-1
-1
0.431
0.094
0.011
0.2
0.42
nodulin putative protein id At3g26430.1
AP001298
-0.1
1.9
-0.3
0.9
0.8
0.572
0.059
0.181
0.195
0.186
unknown protein protein id At3g21430.1
AP001305
-1.5
-1.1
-1.7
-1.7
-0.6
0.048
0.223
0.02
0.258
0.323
hypothetical protein protein id At3g22140.1
AP001306
-0.4
-2.1
-2.1
-1.9
-1.7
0.534
0.152
0.009
0.2
0.055
leucine-rich repeat transmembrane protein kinase putative protein id At3g24240.1
AP002037
0.2
1.4
1.6
2.3
1.1
0.815
0.039
0.022
0.162
0.207
putative protein protein id At5g06640.1
AP002543
0
0.9
1.2
1.1
0.6
0.569
0.175
0.026
0.2
0.108
similar to glycosyl hydrolase family 1 protein id At4g22100.1
AV440212
2.9
1.5
2.5
0.8
1.2
0.018
0.079
0.028
0.236
0.077
ethylene-insensitive 3 (EIN3) protein id At3g20770.1
AV440320
1.9
1.5
1.2
0.6
-0.6
0.051
0.289
0.269
0.501
0.865
WD-40 repeat containing protein id At5g53500.1
AV523644
0.4
1.7
-0.1
0.6
2
0.867
0.059
0.937
0.269
0.348
disease resistance protein (TIR class) putative protein id At1g52900.1
AV534663
0.2
-1.6
-0.8
-1.5
-1
0.935
0.038
0.692
0.209
0.292
disease resistance protein (TIR class) putative protein id At1g52900.1
AV535948
-0.7
-1
-1.7
-1.2
-1.2
0.191
0.058
0.183
0.162
0.065
b/t hypothetical protein protein id At1g05950.1 andexpressed protein protein id At1g05960.1
AV545016
0.3
0.8
1.4
1
1.2
0.654
0.402
0.014
0.231
0.065
putative protein protein id At5g55660.1
AV555032
1.5
0.5
1.5
-0.4
0.8
0.046
0.567
0.291
0.724
0.132
expressed protein protein id At2g42750.1
AV561223
2.3
1.1
1.5
1
1.2
0.048
0.182
0.283
0.227
0.195
hypothetical protein protein id At1g18560.1
AV565230
3.7
2.6
1.7
1
2.4
0.008
0.046
0.118
0.536
0.15
reversibly glycosylated polypeptide-3 protein id At5g15650.1
AV565888
-0.4
1.3
1.5
1.3
1.4
0.737
0.067
0.036
0.162
0.079
b/t Expressed protein protein id At1g65295.1and MADS-box protein protein id At1g65300.1
AV566877
-1.4
1.4
2.2
2.1
1.7
0.723
0.076
0.027
0.162
0.065
b/t putative protein At3g54750 and putative protein At3g54760
AV567227
-1.9
-0.7
-1
-0.6
0.1
0.034
0.165
0.157
0.459
0.958
F-box protein family protein id At3g24760.1
AY035036
3.6
1.3
1.7
0.6
1.4
0.017
0.124
0.05
0.276
0.082
putative lectin protein id At3g16400.1
AY037202
-1.4
-2.2
-1.9
-1.6
-1.3
0.033
0.16
0.008
0.162
0.071
C2H2 type zinc finger protein id At5g44160.1
AY039847
-0.7
-2.8
-3.1
-1.8
-0.4
0.569
0.042
0.037
0.16
0.52
putative protein protein id At5g06660.1
AY039878
-1.3
-1.6
-1.9
-0.8
-0.4
0.211
0.058
0.028
0.22
0.603
putative cyclin-dependent protein kinase protein id At3g05050.1
AY039949
0.9
1.7
1.7
1.4
1.4
0.176
0.057
0.074
0.258
0.059
putative dimethyladenosine transferase protein id At2g47420.1
AY042801
3.6
2.3
5.2
1.2
1.9
0.015
0.149
0.051
0.277
0.094
putative protein protein id At5g54650.1
AY042873
-0.8
-0.8
-1.8
-1.3
-1
0.114
0.157
0.016
0.184
0.108
H+-transporting ATP synthase chain 9-like protein
AY042887
-0.2
-1.1
-1.3
-1.1
-0.9
0.773
0.07
0.036
0.201
0.14
putative flavonol sulfotransferase protein id At1g74100.1
AY042899
0.7
1.6
1.8
1.7
1.6
0.329
0.05
0.031
0.195
0.065
putative protein protein id At5g54870.1
AY045894
3.2
1.5
2.8
1
1.2
0.048
0.052
0.018
0.391
0.217
homeobox protein HAT22 protein id At4g37790.1
AY045896
-0.9
-1
-1.9
-1.2
-1.3
0.244
0.09
0.008
0.184
0.065
nodulin-like protein protein id At1g75500.1
AY045962
1.2
2
3.4
2.5
1.8
0.186
0.112
0.009
0.228
0.231
putative proline-rich cell wall protein id At1g62500.1
AY046033
0.4
1.5
1.9
2
1.3
0.736
0.084
0.054
0.162
0.141
C3HC4 type RING zinc finger id At5g48655.2
AY048237
-1.7
-0.2
-1.8
-0.5
-0.9
0.452
0.747
0.026
0.345
0.282
imidazoleglycerol-phosphate dehydratase protein id
AY049266
-0.7
-1.6
-1.7
-1.9
-1.4
0.202
0.059
0.006
0.184
0.059
diaminopimelate decarboxylase-like protein
BE037738
-1.2
-2.8
-3.2
-2.5
-1.9
0.183
0.012
0.008
0.196
0.059
putative protein protein id At5g20290.1
AL035356
2.3
2.1
2.2
0.9
1.1
0.055
0.058
0.014
0.2
0.245
putative protein protein id At4g24680.1
AL035356
-0.5
-1.6
-1.8
-1.6
-1.1
0.055
0.058
0.014
0.2
0.245
glycosyl hydrolase family 9 protein id At4g23560.1
AL035394
-0.2
-2.8
-2.3
-1.8
-1.5
0.655
0.056
0.009
0.218
0.082
putative protein protein id At4g27030.1
AL035440
-1.2
-0.6
-0.8
-1.4
-2
0.154
0.224
0.393
0.214
0.061
pectinesterase (pectin methylesterase) putative protein id At4g28090.1
AL035524
0.1
0.9
1.6
1.5
1.1
0.239
0.087
0.083
0.184
0.112
cytochrome p450 family protein id At4g37360.1
AL035601
-0.8
-1.3
-1.7
-2.1
-1.7
0.201
0.07
0.014
0.209
0.095
cysteine proteinase RD19A protein id At4g39090.1
AL035679
-0.7
-1.8
-1.4
-1
-1.1
0.213
0.05
0.012
0.162
0.071
putative fructose-bisphosphate aldolase protein id At4g38970.1
AL035679
-1
-1.6
-2.2
-2
-0.5
0.213
0.05
0.012
0.162
0.071
GTP-binding protein putative protein id At4g09720.1
AL049482
-0.4
-2.3
-2.2
-1.8
-1.2
0.637
0.019
0.006
0.162
0.071
putative protein protein id At4g12150.1
AL049638
-0.7
-0.7
-1
-1.3
-2.7
0.154
0.059
0.008
0.179
0.321
auxilin-like protein protein id At4g12780.1
AL049640
3.8
1.3
1.4
0.8
2.6
0.008
0.198
0.368
0.278
0.141
Wall associated kinase 4 id At3g57770.1
AL049660
3
2.8
2.9
0.7
1.7
0.008
0.052
0.069
0.195
0.154
hypothetical protein protein id At4g39340.1
AL050351
-0.3
1.1
2.1
1.6
1.1
0.653
0.07
0.01
0.276
0.094
putative protein protein id At3g61720.1
AL132959
0.4
1.7
2.3
1.5
0.8
0.616
0.059
0.008
0.201
0.158
putative protein protein id At3g49460.1
AL132964
0.6
1
1.4
1.2
1.2
0.417
0.119
0.014
0.235
0.065
RRM-containing protein protein id At3g52980.1
AL132969
1.3
2.1
3.7
2.8
3
0.312
0.065
0.011
0.162
0.065
Calmodulin binding protein id At3g52290.1
AL132972
-1.5
-2.1
-1.9
-1.6
-1.3
0.094
0.019
0.139
0.193
0.065
anthranilate N-hydroxycinnamoyl/benzoyltransferase -like protein protein id At3g50270.1
AL132976
-0.1
1.6
1.6
0.8
1.2
0.311
0.094
0.023
0.252
0.061
auxin-regulated protein protein id At3g57810.1
AL132977
-0.4
-1.2
-1.6
-1.4
-1
0.626
0.058
0.012
0.16
0.082
putative Aspartyl protease id At3g51340.1
AL132980
5.5
3.3
5.2
1.2
1.7
0.001
0.019
0.008
0.2
0.191
hypothetical protein protein id At3g57500.1
AL133248
-1.6
-0.9
-1.4
-1.8
-1
0.32
0.097
0.05
0.16
0.084
putative protein protein id At3g46500.1
AL133314
0.5
1.2
2.1
1.5
1.1
0.113
0.064
0.022
0.186
0.157
putative protein protein id At3g50440.1
AL133363
0.2
2.1
3.4
3.4
3.4
0.272
0.05
0.014
0.16
0.023
putative protein protein id At3g42800.1
AL138639
-0.7
-0.8
-1.3
-1.3
-0.9
0.308
0.205
0.025
0.162
0.206
putative protein protein id At3g54740.1
AL138650
1.2
0.2
0.2
-0.2
0.4
0.094
0.147
0.153
0.263
0.473
putative protein protein id At3g45460.1
AL138657
-0.8
-1.5
-1.7
-1.9
-1.5
0.158
0.12
0.009
0.16
0.067
Calcineurin-B-like protein 5 id At4g01420.1
AL161491
0.7
0.6
0.9
1.4
0.8
0.469
0.056
0.313
0.174
0.154
expansin putative protein id At4g01630.1
AL161492
2.5
1.1
2.8
0.2
2.1
0.045
0.142
0.016
0.252
0.115
CHP-rich zinc finger protein putative protein id At4g01910.1
AL161493
1.1
2
2.8
1.9
1.5
0.029
0.039
0.01
0.162
0.082
pseudogene putative transposon protein protein id At4g04050
AL161499
-0.5
-1.1
-1.4
-1.4
-1.6
0.551
0.092
0.031
0.184
0.065
CH3C4 RING zinc finger protein id At4g05350.1
AL161503
-0.7
-2
-1.9
-1.4
-0.8
0.171
0.052
0.006
0.201
0.115
putative polyprotein protein id At4g07500.1
AL161506
-0.5
-1.5
-2.1
-1.4
-1.1
0.417
0.089
0.006
0.214
0.077
putative phosphoglyceride transfer protein protein id At4g08690.1
AL161512
-0.7
1
1.9
1.9
0.6
0.326
0.185
0.009
0.218
0.399
receptor protein kinase-like protein protein id At4g08850.1
AL161513
-0.5
-1.5
-1.8
-1.2
-1
0.455
0.058
0.01
0.162
0.075
hypothetical protein protein id At4g14250.1
AL161538
0.2
1.4
2.4
2.2
1.9
0.119
0.029
0.008
0.16
0.06
hypothetical protein protein id At4g14260.1
AL161538
-0.1
0.9
1.6
1.5
1.2
0.119
0.029
0.008
0.16
0.06
heterogeneous nuclear ribonucleoprotein(hnRNP) putative protein id At4g14300.1
AL161538
-1.2
-2.1
-1.9
-1.3
-1.1
0.119
0.029
0.008
0.16
0.06
disease resistance protein (TIR-NBS-LRR class) putative protein id At4g14370.1
AL161538
-0.2
-1.2
-1.4
-1.4
-1.3
0.119
0.029
0.008
0.16
0.06
glucosyltransferase protein id At4g15260.1
AL161541
0.2
1.2
1.4
1.4
1.4
0.264
0.058
0.025
0.195
0.075
splicing factor like protein protein id At4g15580.1
AL161542
-0.1
1.2
1.8
1.8
1.1
0.669
0.084
0.024
0.16
0.086
monoterpene synthase/cyclase family protein id At4g16730.1
AL161544
-1.6
-0.8
-1.9
1.3
0.5
0.088
0.094
0.031
0.186
0.345
cyanohydrin lyase like protein protein id At4g16690.1
AL161544
-1
-1.2
-1.5
-1.1
-0.7
0.088
0.094
0.031
0.186
0.345
trehalose-6-phosphate synthase like protein protein id At4g17770.1
AL161547
-1.2
-1.9
-1.8
-2.3
-1.3
0.094
0.114
0.112
0.16
0.059
b/t WAK-like kinase (WLK) protein id At4g31110.1and putative protein protein id At4g31130.1
AL161578
-0.9
-0.6
-1.5
-1.5
0
0.194
0.168
0.074
0.174
0.533
secretory protein - like protein id At3g60720.1
AL162295
-0.6
-1
-1
-1
-0.8
0.266
0.111
0.028
0.186
0.112
putative protein protein id At5g01790.1
AL162351
-0.7
-0.9
-1.3
-0.1
-0.4
0.433
0.104
0.025
0.351
0.14
Expressed protein protein id At5g02220.1
AL162508
-0.4
-1.4
-1.6
-1.8
-1.1
0.154
0.104
0.042
0.16
0.06
putative protein protein id At3g62730.1
AL162651
-0.8
-2.4
-2
-1.7
-0.9
0.441
0.094
0.033
0.195
0.167
putative protein protein id At5g03400.1
AL162751
0.5
-0.2
1.5
1.1
1.5
0.241
0.331
0.039
0.284
0.317
putative protein protein id At5g13470.1
AL163572
-2.2
-4.2
-3.4
-1.5
-1.2
0.134
0.132
0.009
0.218
0.065
putative protein protein id At5g11430.1
AF087015
-0.8
-1.6
-1.5
-1.6
-1.1
0.148
0.05
0.011
0.16
0.075
Abnormal floral organs protein id At2g45190.1
AF102821
-1.9
-3.7
-4
-2.4
-2.5
0.091
0.013
0.001
0.162
0.053
actin depolymerizing factor 3 - like protein protein id At5g59880.1
AF134120
-0.7
-2.7
-4.9
-1.7
-1.6
0.235
0.024
0.004
0.551
0.121
light-harvesting chlorophyll a/b binding protein protein id At3g61470.1
AF134302
1
1.5
2.6
2
2.3
0.1
0.24
0.006
0.247
0.017
AtCLH2 (gb|AAF27046.1) protein id At5g43860.1
AF195891
-0.6
-1.5
-1
-0.8
-0.9
0.392
0.176
0.031
0.222
0.094
arabinogalactan-protein (AGP10) protein id At4g09030.1
AF220201
0.9
1.9
0
1
1.6
0.311
0.057
0.923
0.391
0.065
putative fatty acid desaturase protein id At4g04930.1
AF262042
2.6
1.4
3.3
0.6
1.8
0.018
0.12
0.005
0.517
0.108
Athila retroelement ORF2 putative protein id At5g32475.1
AF286050
-0.5
-1.2
-1.1
-0.5
-0.9
0.361
0.073
0.028
0.411
0.094
CBL-interacting protein kinase 2 id At5g07070.1
AF324670
0.2
0.7
1.4
1.9
1.1
0.88
0.289
0.017
0.162
protein id At1g53240.1
AF325002
1.6
1.2
0.9
1
0.4
0.069
0.099
0.202
0.201
putative protein protein id At4g37020.1
AF325018
2.4
1
1.6
1
1
0.017
0.341
0.029
0.247
putative 3 exoribonuclease protein id At3g07750.1
AF326860
0.8
2.9
3.3
2.3
3.2
0.341
0.031
0.014
0.251
thioredoxin putative protein id At1g50320.1
AF355755
-0.5
1.8
0.9
0.4
0.6
0.837
0.064
0.661
0.426
expressed protein protein id At1g16240.1
AF360261
-0.6
-2.1
-1.8
-1.9
-1.4
0.268
0.058
0.015
0.16
expressed protein protein id At2g31410.1
AF360272
2.6
1.9
2.5
0.9
2.6
0.033
0.183
0.009
0.254
major surface glycoprotein, Metalloendopeptidase At5g42620.1
AF367294
1
1.7
2.1
1.2
1.5
0.521
0.171
0.008
0.195
RNA/ssDNA-binding protein - like protein id At5g58470.2
AF367334
1.7
1.7
2.2
1.6
2.2
0.029
0.251
0.105
0.347
RRM-containing protein protein id At1g22910.1
AF370210
2.9
1.4
1.5
0.2
1
0.008
0.066
0.036
0.832
NAD dependent epimerase putative protein id At3g23820.1
AF370264
-0.3
-0.8
-1.9
-1.4
-1.4
0.735
0.186
0.012
0.162
expressed protein protein id At1g70090.1
AF372898
-0.2
-0.5
-2.4
-1.5
-0.5
0.818
0.478
0.017
0.199
protein id At5g66570.1
AF375429
2.9
0.4
2.2
1.2
2.1
0.011
0.708
0.102
0.523
glycine-rich cell wall protein-like protein id At4g18280.1
AF378886
-0.5
-2.4
-1.6
-0.6
-1
0.613
0.043
0.03
0.35
expressed protein protein id At5g22580.1
AF378891
-1.5
-1.7
-2.6
-1
-0.9
0.138
0.052
0.167
0.377
b/t putative protein protein id At4g08280.1 and nodulin-like protein protein id At4g08290.1
AF378899
0.6
1.1
1.5
1.3
1.2
0.52
0.067
0.057
0.185
RRM-containing protein protein id At5g04600.1
AF380633
0.7
1.8
0.8
1.2
0.4
0.732
0.058
0.316
0.56
Expressed protein protein id At3g13175.1
AF380640
-0.8
-0.9
-1.4
-1.6
-1.1
0.419
0.171
0.016
0.162
-2.142
AF385725
-0.5
-1.9
-1.3
-1.5
-1.6
0.608
0.058
0.036
0.162
Arabidopsis Psuedo-response regulator 2 id At4g18020.1
AF386956
-0.9
-1.3
-1.2
-1.6
-0.9
0.258
0.224
0.026
0.238
putative protein protein id At5g03120.1
AF386993
-0.3
-1.1
-1.9
-1.8
-1.2
0.667
0.219
0.009
0.184
0.111
AF389297
1.3
1.2
1.7
0.6
1.1
0.156
0.086
0.016
0.503
major latex protein (MLP)-related protein id At4g23670.1
AI998348
-0.8
-1.7
-1.8
-0.9
-0.8
0.718
0.067
0.009
0.229
hypothetical protein protein id At2g30700.1
AJ010713
0.3
0.6
1.5
1.6
1.2
0.773
0.433
0.02
0.214
id At2g26250.1
AJ012459
-0.8
-1.5
-1.4
-1.5
-1.1
0.138
0.152
0.015
0.16
arabinogalactan-protein (AGP6) protein id At5g14380.1
AL021710
0.8
0.2
1.3
0.2
2.2
0.529
0.364
0.032
0.335
KH domain protein protein id At4g18375.1
AL021749
-0.6
-2.5
-2.3
-1.3
-0.5
0.52
0.22
0.01
0.184
NAM / CUC2 -like protein protein id At4g28530.1
AL021768
-1.1
0.8
1.5
0.9
0.9
0.204
0.16
0.016
0.16
hypothetical protein protein id At4g19620.1
AL021768
-1.1
-0.9
-1.4
-2.2
-1.9
0.204
0.16
0.016
0.16
putative protein protein id At4g19590.1
AL021889
-1.2
-1.5
-1.6
-1.7
-1.2
0.048
0.059
0.012
0.162
NAM (no apical meristem) - like protein protein id At4g17980.1
AL022197
0.6
0.6
1.4
0.9
1.2
0.426
0.236
0.101
0.265
actin depolymerizing factor-like protein protein id At4g25590.1
AL022347
-1
0.5
0.9
-0.3
0.2
0.072
0.303
0.02
0.384
putative protein protein id At4g23160.1
AL022537
-0.7
2.2
2.4
3.1
2.1
0.547
0.084
0.017
0.199
Mitochondrial glycoprotein id At4g32610.1
AL022580
-0.4
-1.3
-1.4
-0.9
-0.4
0.496
0.058
0.096
0.2
0.094
expressed protein protein id At4g19430.1
AL022603
0.9
0.9
1.9
1.5
0.6
0.56
0.111
0.022
0.193
0.169
Lsd1 like protein protein id At4g21610.1
AL022605
-0.1
-0.5
-1.1
-0.9
-0.5
0.268
0.07
0.026
0.203
0.154
copper chaperone (CCH)-related protein id At4g39700.1
AL024486
-1.3
-2.3
-2.2
-1.4
-1.2
0.103
0.031
0.004
0.209
0.075
glycosyl hydrolase family 18 protein id At4g19720.1
AL030978
-5.2
-6.1
-6.2
-5.2
-6.1
0.073
0.013
0.009
0.16
0.001
extensin-like protein protein id At4g33970.1
AL031032
-0.6
-1.6
-2.6
-1.3
-1.3
0.184
0.03
0.075
0.162
0.082
expressed protein protein id At4g23470.1
AL031326
-0.5
-0.9
-1.3
-1.8
-1
0.531
0.107
0.035
0.218
0.105
pyruvate decarboxylase-1 (Pdc1) protein id At4g33070.1
AL031804
-1.2
-1.9
-1.4
-1.7
-1.6
0.162
0.025
0.227
0.16
0.065
putative protein protein id At4g22540.1
AL033545
-2
-1.8
-2.5
-1.7
-1.4
0.024
0.05
0.011
0.16
0.093
putative protein protein id At4g24750.1
AC009894
0.2
1.2
1.5
1.2
1.2
0.647
0.104
0.017
0.227
0.083
unknown protein protein id At1g56020.1
AC010924
0.3
1.4
0.6
0.7
0.8
0.457
0.059
0.006
0.201
0.134
DNA repair protein RAD23 id At1g16190.1
AC011623
-0.9
-1.8
-3.5
-0.2
-1.1
0.154
0.056
0.005
0.184
0.079
putative pyruvate dehydrogenase kinase protein id At3g06483.1
AC011717
1.9
0.7
3.3
1
1.7
0.046
0.535
0.104
0.251
0.08
expressed protein protein id At1g80000.1
AC011765
0.7
0.8
1.3
1.4
1.5
0.166
0.065
0.028
0.162
0.107
hypothetical protein protein id At1g74600.1
AC011809
0.2
1.8
2.1
2.6
2
0.663
0.05
0.09
0.184
0.091
myb-related transcription factor mixta putative protein id At1g18710.1
AC012190
-0.1
-1.3
-1.7
-1.4
-0.9
0.588
0.094
0.01
0.201
0.211
expressed protein protein id At1g21090.1
AC012375
-2.8
1.1
2.5
2
2.2
0.597
0.329
0.026
0.184
0.098
hypothetical protein protein id At1g27670.1
AC013354
0.1
1.2
1.2
1.7
1.5
0.572
0.195
0.202
0.162
0.092
Early phytochrome responsive 1 Myb factor id At1g18330.1
AC013430
-1
-1.5
-1.7
-1.2
-1.1
0.173
0.05
0.008
0.184
0.082
expressed protein protein id At1g78410.1
AC013483
1.2
2.3
2.9
1.7
3
0.149
0.05
0.006
0.199
0.065
polygalacturonase putative protein id At3g07830.1
AC015986
0.7
1.8
2.4
2.3
2
0.241
0.025
0.019
0.2
0.027
hypothetical protein protein id At1g68380.1
AC016041
0.6
1.5
1.6
1.5
1
0.246
0.05
0.045
0.267
0.09
oleosin protein id At1g48990.1
AC016661
0.5
1.8
1.8
1.4
1.4
0.463
0.052
0.031
0.201
0.105
unknown protein protein id At3g09570.1
AC018363
2.5
1.3
1.6
0.4
1.9
0.045
0.097
0.222
0.312
0.207
unknown protein protein id At3g02900.1
AC018722
-0.8
-1.8
-2.2
-1.3
-1.5
0.311
0.034
0.006
0.193
0.082
putative two-component response regulator protein protein id At2g25180.1
AC018748
1.4
3.3
3.5
2.7
3.2
0.374
0.058
0.009
0.16
0.065
receptor-like serine/threonine kinase putative protein id At1g53430.1
AC022464
3.4
3.5
3.2
0.3
4.7
0.018
0.013
0.016
0.288
0.059
FtSH protease of mitochondria id At1g07510.1
AC023279
-0.6
-1.2
-2
-1.3
-0.8
0.601
0.124
0.029
0.2
0.119
LRR protein kinase id At1g34420.1
AC023913
-0.8
-0.8
-1
-1.6
-0.9
0.163
0.058
0.044
0.162
0.098
hypothetical protein protein id At1g34355.1
AC025808
-0.4
-2.5
-3.4
-2
-1.7
0.124
0.027
0.002
0.184
0.059
hypothetical protein protein id At1g19380.1
AC026875
-0.9
-1.3
-2.2
-2.3
-1.2
0.12
0.05
0.006
0.184
0.065
GATA zinc finger protein protein id At1g08000.1
AC027034
2.6
1.3
1.1
0.9
1
0.008
0.182
0.024
0.224
0.304
n-calpain-1 large subunit putative protein id At1g55350.1
AC027034
2
0.7
1.9
0.5
1.1
0.008
0.182
0.024
0.224
0.304
Phenyl-alanyl tRNA ligase id At1g55170.1
AC051630
-0.7
-1.5
-2.1
-0.9
-1.8
0.321
0.072
0.008
0.199
0.199
expressed protein protein id At1g33490.1
AC066690
-1.4
-1.1
-1.9
-2
-1.5
0.046
0.092
0.012
0.162
0.065
hypothetical protein protein id At1g37080.1
AC068901
2.5
0.4
0.6
0.1
0.3
0.018
0.241
0.32
0.348
0.248
hypothetical protein protein id At1g36820.1
AC069252
1.7
1.4
1.1
0.8
0.7
0.046
0.075
0.105
0.379
0.255
b/t expressed protein protein id At1g22030.1and hypothetical protein protein id At1g22040.1