Species & Dataset
  • Quercus rubra

  • Common name: Northern red oak

  • Family: Fagaceae

Foliar ozone injury
Injury pic.jpg
Experiment
  • Cultivar: Quercus rubra L.

  • Tissue: Shoot leaves

  • Ozone concentration: < 10 ppb (control), 150 ppb, 225 ppb, and 300 ppb

  • Ozone exposure: 28 days (8 hrs/day)

  • Sampling time: 3 time points (7 h, 14 days, 28 days) after stress initiation

  • Platform: HiSeq 2500 (Illumina)

  • Year of study: 2020

  • Location: USA

Title: Transcriptome profiles of Quercus rubra responding to increased O3 stress

Summary: Climate plays an essential role in forest health, and climate change may increase forest productivity losses due to abiotic and biotic stress. Increased temperature leads to the increased formation of ozone (O3). Ozone is formed by the interaction of sunlight, molecular oxygen and by the reactions of chemicals commonly found in industrial and automobile emissions such as nitrogen oxides and volatile organic compounds. Although it is well known that productivity of Northern red oak (Quercus rubra) (NRO), an ecologically and economically important species in the forests of eastern North America, is reduced by exposure to O3, limited information is available on its responses to exogenous stimuli at the level of gene expression. RNA sequencing yielded more than 323 million high-quality raw sequence reads. De novo assembly generated 52,662 unigenes, of which more than 42,000 sequences could be annotated through homology-based searches. A total of 4140 differential expressed genes (DEGs) were detected in response to O3 stress, as compared to their respective controls. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses of the O3-response DEGs revealed perturbation of several biological pathways including energy, lipid, amino acid, carbohydrate and terpenoid metabolism as well as plant-pathogen interaction.This study provides the first reference transcriptome for NRO and initial insights into the genomic responses of NRO to O3. Gene expression profiling reveals altered primary and secondary metabolism of NRO seedlings, including known defense responses such as terpenoid biosynthesis.

 

Data repository: SRA (Bioproject accession PRJNA273270)

Reference: Lane, T., Best, T., Zembower, N., Davitt, J., Henry, N., Xu, Y., Koch, J., Liang, H., McGraw, J., Schuster, S. and Shim, D., 2016. The green ash transcriptome and identification of genes responding to abiotic and biotic stresses. BMC genomics, 17(1), pp.1-16.

Gene_name
logFC
FDR P-value
Description
Quercus_rubra_120313_comp6367_c0_seq1
1.902167288
0.04920012458
"---NA---";
Quercus_rubra_120313_comp28709_c0_seq1
-1.992672773
0.04945734215
"3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like";Ontology_id "GO:0005789,GO:0050661,GO:0016021,GO:0015936,GO:0055114,GO:0004420,GO:0016126,GO:0016104";Enzyme_code "EC:1.1.1.34";Enzyme_name "Hydroxymethylglutaryl-CoA reductase (NADPH)";
Quercus_rubra_120313_comp30430_c0_seq1
2.602495872
0.0000308
"uroporphyrinogen-III C-methyltransferase";Ontology_id "GO:0009507,GO:0019354,GO:0055114,GO:0004851,GO:0032259";Enzyme_code "EC:2.1.1.107";Enzyme_name "Uroporphyrinogen-III C-methyltransferase";
Quercus_rubra_120313_comp29209_c0_seq1
1.76897307
0.0000661
"formate mitochondrial";Ontology_id "GO:0042183,GO:0051287,GO:0004617,GO:0005739,GO:0008863,GO:0055114,GO:0009070";Enzyme_code "EC:1.1.1.95,EC:1.2.1.2";Enzyme_name "Phosphoglycerate dehydrogenase,Acting on the aldehyde or oxo group of donors";
Quercus_rubra_120313_comp16755_c0_seq1
1.465973128
0.0007349795144
"two-component response regulator-like APRR1";Ontology_id "GO:0007165,GO:0005622";
Quercus_rubra_120313_comp20809_c0_seq2
2.107743093
0.0007349795144
"---NA---";
Quercus_rubra_120313_comp11359_c0_seq1
1.320164607
0.0007435136036
"---NA---";
Quercus_rubra_120313_comp23000_c0_seq2
4.769926788
0.0009903427829
"PREDICTED: uncharacterized protein LOC108983399";
Quercus_rubra_120313_comp11041_c0_seq1
1.152125596
0.001815995425
"---NA---";
Quercus_rubra_120313_comp23226_c0_seq2
1.364805561
0.001923818877
"transcription elongation factor B polypeptide 1";Ontology_id "GO:0009056,GO:0005829,GO:0008135,GO:0016740,GO:0006139,GO:0005654";
Quercus_rubra_120313_comp29639_c0_seq1
1.186642607
0.004215679194
"ferredoxin--NADP root chloroplastic";Ontology_id "GO:0055114,GO:0004324";Enzyme_code "EC:1.18.1,EC:1.18.1.2";Enzyme_name "Acting on iron-sulfur proteins as donors,Ferredoxin--NADP(+) reductase";
Quercus_rubra_120313_comp23705_c0_seq1
1.541699431
0.005436428789
"---NA---";
Quercus_rubra_120313_comp20714_c0_seq1
1.805945673
0.006867756963
"Hypoxia-responsive family";Ontology_id "GO:0009628,GO:0016020,GO:0016740,GO:0006950";
Quercus_rubra_120313_comp31659_c0_seq3
1.082370681
0.01359503473
"protease Do-like chloroplastic";Ontology_id "GO:0019538,GO:0006091,GO:0009056,GO:0016020,GO:0016043,GO:0015979,GO:0009536,GO:0009579,GO:0016787";Enzyme_code "EC:3.4.21";Enzyme_name "Acting on peptide bonds (peptidases)";
Quercus_rubra_120313_comp11553_c0_seq1
1.945807731
0.01404064725
"---NA---";
Quercus_rubra_120313_comp11421_c0_seq1
1.652106983
0.0176926403
"---NA---";
Quercus_rubra_120313_comp22524_c0_seq1
1.493346607
0.0176926403
"DNA polymerase epsilon catalytic subunit";
Quercus_rubra_120313_comp28157_c0_seq2
2.091801969
0.0176926403
"ABC transporter F family member 1";Ontology_id "GO:0005524,GO:0055085,GO:0103115,GO:0015439,GO:0015886";Enzyme_code "EC:3.6.1.3,EC:3.6.3.41,EC:3.6.1.15";Enzyme_name "Adenosinetriphosphatase,Heme-transporting ATPase,Nucleoside-triphosphate phosphatase";
Quercus_rubra_120313_comp31799_c0_seq11
3.825467547
0.0176926403
"DETOXIFICATION 2-like isoform X3";
Quercus_rubra_120313_comp29133_c0_seq3
1.921559901
0.02153835855
"bifunctional L-3-cyanoalanine synthase cysteine synthase mitochondrial";Ontology_id "GO:0009507,GO:0030170,GO:0006955,GO:0005507,GO:0005739,GO:0080147,GO:0019500,GO:0004124,GO:0050017,GO:0006535";Enzyme_code "EC:4.4.1.9,EC:2.5.1.47";Enzyme_name "L-3-cyanoalanine synthase,Cysteine synthase";
Quercus_rubra_120313_comp31190_c0_seq2
1.417098582
0.02153835855
"BnaC01g13070D";
Quercus_rubra_120313_comp30441_c0_seq2
2.860497396
0.0254158432
"Root phototropism 2";Ontology_id "GO:0005634,GO:0005737,GO:0004871,GO:0005515,GO:0007165,GO:0009638";
Quercus_rubra_120313_comp16402_c0_seq1
1.504314527
0.02650972019
"---NA---";
Quercus_rubra_120313_comp24122_c0_seq1
1.06968759
0.02933951334
"ADP,ATP carrier mitochondrial-like";
Quercus_rubra_120313_comp86531_c0_seq1
2.045449688
0.02933951334
"---NA---";
Quercus_rubra_120313_comp23627_c0_seq1
1.433176034
0.03114060135
"uncharacterized protein LOC18787308";Ontology_id "GO:0005739";
Quercus_rubra_120313_comp28461_c0_seq7
2.972387936
0.03114060135
"---NA---";
Quercus_rubra_120313_comp39956_c0_seq1
1.743940039
0.03416232193
"---NA---";
Quercus_rubra_120313_comp138990_c0_seq1
2.867605257
0.03707682807
"---NA---";
Quercus_rubra_120313_comp21777_c0_seq1
1.274578691
0.03707682807
"ATP synthase subunit mitochondrial";Ontology_id "GO:0000166,GO:0016020,GO:0005739,GO:0009058,GO:0006139,GO:0006810,GO:0005215,GO:0016787";Enzyme_code "EC:3.6.1.3,EC:3.6.1.15";Enzyme_name "Adenosinetriphosphatase,Nucleoside-triphosphate phosphatase";
Quercus_rubra_120313_comp25691_c0_seq2
3.240451559
0.03707682807
"ATP-dependent Clp protease proteolytic subunit-related chloroplastic";Ontology_id "GO:0019538,GO:0009536,GO:0006950,GO:0016787";Enzyme_code "EC:3.4.21";Enzyme_name "Acting on peptide bonds (peptidases)";
Quercus_rubra_120313_comp7930_c0_seq1
1.708464065
0.03707682807
"---NA---";
Quercus_rubra_120313_comp19244_c0_seq1
1.211895743
0.03779184533
"---NA---";
Quercus_rubra_120313_comp21116_c0_seq1
6.032677386
0.03779184533
"pentatricopeptide repeat-containing At3g46870";Ontology_id "GO:0005488,GO:0009536";
Quercus_rubra_120313_comp21393_c0_seq2
1.083213048
0.03779184533
"cysteine inhibitor";Ontology_id "GO:0019538,GO:0030234,GO:0009987,GO:0016787";
Quercus_rubra_120313_comp23087_c0_seq1
1.402811967
0.03779184533
"probable mediator of RNA polymerase II transcription subunit 26c";Ontology_id "GO:0005634,GO:0003677,GO:0008135,GO:0006139";
Quercus_rubra_120313_comp23087_c1_seq1
1.246210037
0.03779184533
"probable mediator of RNA polymerase II transcription subunit 26c";Ontology_id "GO:0005634,GO:0003677,GO:0008135,GO:0006139";
Quercus_rubra_120313_comp26846_c0_seq1
3.139953246
0.03779184533
"pterin-4-alpha-carbinolamine dehydratase";Ontology_id "GO:0003824,GO:0009058,GO:0009536,GO:0009987";Enzyme_code "EC:4.2.1.96";Enzyme_name "4a-hydroxytetrahydrobiopterin dehydratase";
Quercus_rubra_120313_comp28185_c0_seq1
2.66938012
0.03779184533
"---NA---";
Quercus_rubra_120313_comp29073_c0_seq6
1.969422981
0.03779184533
"---NA---";
Quercus_rubra_120313_comp29848_c0_seq2
6.221115946
0.03779184533
"PREDICTED: uncharacterized protein LOC104817135";
Quercus_rubra_120313_comp31414_c0_seq4
1.058920608
0.03779184533
"glutathione S-transferase zeta class-like isoform X1";Ontology_id "GO:0009072,GO:0005515,GO:0005737,GO:0004364";Enzyme_code "EC:2.5.1.18";Enzyme_name "Glutathione transferase";
Quercus_rubra_120313_comp31472_c0_seq3
1.623186928
0.03779184533
"heat shock 70 kDa 17";Ontology_id "GO:0000166,GO:0003824,GO:0016020,GO:0008152,GO:0005783,GO:0005794,GO:0005773,GO:0009536";Enzyme_code "EC:1.3.1.74";Enzyme_name "2-alkenal reductase (NAD(P)(+))";
Quercus_rubra_120313_comp41631_c0_seq1
2.0733552
0.03779184533
"---NA---";
Quercus_rubra_120313_comp24445_c0_seq3
1.372899562
0.03934753275
"serine acetyltransferase chloroplastic-like";Ontology_id "GO:0009001,GO:0005737,GO:0006535";Enzyme_code "EC:2.3.1.30";Enzyme_name "Serine O-acetyltransferase";
Quercus_rubra_120313_comp30441_c0_seq3
1.21284443
0.03934753275
"root phototropism 2";Ontology_id "GO:0009606,GO:0009628,GO:0004871";
Quercus_rubra_120313_comp31362_c0_seq1
1.560480175
0.03934753275
"nitrate reductase [NAD(P)H]-like";Ontology_id "GO:0050464,GO:0050463,GO:0030151,GO:0055114,GO:0006809,GO:0009703,GO:0043546,GO:0020037,GO:0042128";Enzyme_code "EC:1.7.1.2,EC:1.7.1.1,EC:1.7.1.3,EC:1.7.99.4";Enzyme_name "Nitrate reductase (NAD(P)H),Nitrate reductase (NADH),Nitrate reductase (NADPH),Nitrate reductase";
Quercus_rubra_120313_comp15761_c0_seq1
1.421245756
0.04113779699
"---NA---";
Quercus_rubra_120313_comp23813_c0_seq3
1.206626033
0.0432564067
"transcription initiation factor TFIID subunit 15b";Ontology_id "GO:0000166,GO:0003676";
Quercus_rubra_120313_comp8390_c0_seq1
1.134943536
0.04781792766
"---NA---";
Quercus_rubra_120313_comp18756_c0_seq1
1.262538334
0.04874101271
"26S proteasome non-ATPase regulatory subunit 4 homolog";Ontology_id "GO:0005634,GO:0019538,GO:0005515,GO:0009056,GO:0016043,GO:0005829";
Quercus_rubra_120313_comp30796_c1_seq19
-8.041854221
0.005271856079
RETICULATA-RELATED chloroplastic;Ontology_id "GO:0016020";
Quercus_rubra_120313_comp31744_c0_seq3
4.814625621
0.0008778450936
"photosystem II 44 kDa (chloroplast)";Ontology_id "GO:0009772,GO:0046872,GO:0045156,GO:0009523,GO:0016021,GO:0018298,GO:0016168,GO:0009535";
Quercus_rubra_120313_comp29848_c0_seq2
8.237663245
0.002162618896
"PREDICTED: uncharacterized protein LOC104817135";
Quercus_rubra_120313_comp31015_c0_seq15
5.082940258
0.002162618896
"cytochrome b6 (chloroplast)";Ontology_id "GO:0005506,GO:0022904,GO:0016021,GO:0015979,GO:0045158,GO:0009535,GO:0020037";
Quercus_rubra_120313_comp31744_c0_seq2
3.506305386
0.002162618896
"photosystem II D2 (chloroplast)";Ontology_id "GO:0009772,GO:0005506,GO:0045156,GO:0009523,GO:0016021,GO:0018298,GO:0016168,GO:0009535";
Quercus_rubra_120313_comp11715_c0_seq1
3.92573212
0.003735976305
"ATP synthase subunit";Ontology_id "GO:0005739";
Quercus_rubra_120313_comp20455_c0_seq1
4.447789274
0.003735976305
"ribulose-1,5-bisphosphate carboxylase oxygenase large subunit (chloroplast)";Ontology_id "GO:0000287,GO:0009507,GO:0019253,GO:0009853,GO:0055114,GO:0004497,GO:0016984";Enzyme_code "EC:4.1.1.39";Enzyme_name "Ribulose-bisphosphate carboxylase";
Quercus_rubra_120313_comp31015_c0_seq16
4.53723217
0.003735976305
"photosystem II 47 kDa (chloroplast)";Ontology_id "GO:0009772,GO:0045156,GO:0009523,GO:0016021,GO:0018298,GO:0016168,GO:0009535";
Quercus_rubra_120313_comp31015_c0_seq6
4.93870561
0.003735976305
"photosystem II CP47 chlorophyll apo (plastid)";Ontology_id "GO:0009772,GO:0045156,GO:0009523,GO:0016021,GO:0018298,GO:0016168,GO:0009535";
Quercus_rubra_120313_comp31485_c0_seq1
4.329899672
0.003735976305
"photosystem I P700 apo A1 (chloroplast)";Ontology_id "GO:0000287,GO:0009055,GO:0016021,GO:0009522,GO:0018298,GO:0015979,GO:0055114,GO:0051539,GO:0016168,GO:0009535";
Quercus_rubra_120313_comp32124_c0_seq1
5.073652011
0.003735976305
"photosystem II D1 (chloroplast)";Ontology_id "GO:0010242,GO:0009772,GO:0009523,GO:0045157,GO:0009635,GO:0009535,GO:0005515,GO:0005506,GO:0045156,GO:0016021,GO:0018298,GO:0016168,GO:0010287";
Quercus_rubra_120313_comp8087_c0_seq1
4.959537564
0.003735976305
"Ycf68 (chloroplast)";Ontology_id "GO:0003824,GO:0005488,GO:0009536";
Quercus_rubra_120313_comp31485_c0_seq10
4.439696705
0.003820478988
"photosystem I P700 chlorophyll a apo A2 (chloroplast)";Ontology_id "GO:0000287,GO:0009055,GO:0016021,GO:0009522,GO:0018298,GO:0015979,GO:0055114,GO:0051539,GO:0016168,GO:0009535";
Quercus_rubra_120313_comp23553_c1_seq1
5.196823737
0.005271856079
"Metallocarboxypeptidase inhibitor";Ontology_id "GO:0005739,GO:0009536";
Quercus_rubra_120313_comp31647_c0_seq5
5.952911141
0.005271856079
"---NA---";
Quercus_rubra_120313_comp11010_c0_seq1
4.952199205
0.005698112836
"Ribulose bisphosphate carboxylase large chain";Ontology_id "GO:0000166,GO:0005739,GO:0006464,GO:0005840,GO:0016301,GO:0009536";Enzyme_code "EC:4.1.1.39,EC:2.7.11";Enzyme_name "Ribulose-bisphosphate carboxylase,Transferring phosphorus-containing groups";
Quercus_rubra_120313_comp33047_c0_seq1
3.454914117
0.005698112836
"ATP synthase subunit";Ontology_id "GO:0005739";
Quercus_rubra_120313_comp15719_c0_seq1
4.961627004
0.007194610428
"hypothetical protein TanjilG_12081";Ontology_id "GO:0016020";
Quercus_rubra_120313_comp25563_c0_seq1
4.315359149
0.007770355751
"PREDICTED: uncharacterized protein LOC108867875, partial";
Quercus_rubra_120313_comp22064_c0_seq1
4.98158503
0.008437625294
"hypothetical protein GLYMA_13G021700, partial";
Quercus_rubra_120313_comp13437_c0_seq1
4.017293667
0.00859818909
"hypothetical protein (mitochondrion)";Ontology_id "GO:0005739";
Quercus_rubra_120313_comp33342_c0_seq1
4.273118768
0.00859818909
"Cell wall-associated hydrolase";
Quercus_rubra_120313_comp59871_c0_seq1
4.223705488
0.00859818909
"photosystem II Z (chloroplast)";Ontology_id "GO:0006091,GO:0016020,GO:0015979,GO:0009536,GO:0009579";
Quercus_rubra_120313_comp11688_c0_seq1
3.779405723
0.008871963425
"hypothetical protein (mitochondrion)";Ontology_id "GO:0005739";
Quercus_rubra_120313_comp8060_c0_seq1
3.957771677
0.008871963425
"ATP synthase subunit mitochondrial-like";Ontology_id "GO:0003824,GO:0005739,GO:0016020,GO:0005488,GO:0006810,GO:0005215";Enzyme_code "EC:1.9.3.1";Enzyme_name "Cytochrome-c oxidase";
Quercus_rubra_120313_comp29685_c0_seq9
4.878996643
0.01252353859
"hypothetical chloroplast RF34 (chloroplast)";Ontology_id "GO:0009535,GO:0005515,GO:0015979";
Quercus_rubra_120313_comp11813_c0_seq1
5.79570738
0.01438607939
"NADH dehydrogenase subunit 3 (chloroplast)";Ontology_id "GO:0048038,GO:0008137,GO:0016021,GO:0019684,GO:0055114,GO:0006810,GO:0005886,GO:0009535";Enzyme_code "EC:1.6.99.5,EC:1.6.99.3,EC:1.6.5.3";Enzyme_name "Acting on NADH or NADPH,NADH dehydrogenase,NADH:ubiquinone reductase (H(+)-translocating)";
Quercus_rubra_120313_comp30616_c0_seq6
3.701384983
0.01438607939
"maturase K (chloroplast)";Ontology_id "GO:0003723,GO:0006139,GO:0009536";
Quercus_rubra_120313_comp30956_c0_seq2
1.401517895
0.0144783532
"malate cytoplasmic-like isoform X2";Ontology_id "GO:0005975,GO:0006091,GO:0003824";Enzyme_code "EC:1.1.1.37";Enzyme_name "Malate dehydrogenase";
Quercus_rubra_120313_comp20555_c0_seq1
3.730416134
0.01559402443
"ATP synthase CF1 beta subunit (chloroplast)";Ontology_id "GO:0000166,GO:0009058,GO:0006139,GO:0006810,GO:0005886,GO:0009536,GO:0005215,GO:0009579,GO:0016787";Enzyme_code "EC:3.6.1.3,EC:3.6.1.15";Enzyme_name "Adenosinetriphosphatase,Nucleoside-triphosphate phosphatase";
Quercus_rubra_120313_comp7484_c0_seq1
3.930440996
0.02437486039
"NADH dehydrogenase subunit I (chloroplast)";Ontology_id "GO:0048038,GO:0005506,GO:0008137,GO:0019684,GO:0055114,GO:0051539,GO:0005886,GO:0009535";Enzyme_code "EC:1.6.99.5,EC:1.6.99.3,EC:1.6.5.3";Enzyme_name "Acting on NADH or NADPH,NADH dehydrogenase,NADH:ubiquinone reductase (H(+)-translocating)";
Quercus_rubra_120313_comp250909_c0_seq1
4.719263714
0.04592246057
"Retrovirus-related Pol poly from transposon TNT 1-94";
Quercus_rubra_120313_comp20456_c0_seq1
4.685611653
0.04967114306
"hypothetical protein MTR_5g067940";
Quercus_rubra_120313_comp25722_c0_seq3
-2.063444765
7.06e-7
"sec-independent translocase chloroplastic";
Quercus_rubra_120313_comp29968_c1_seq1
-10.59011133
0.0007975394149
"---NA---";
Quercus_rubra_120313_comp20517_c0_seq1
-3.956456291
0.001815995425
"probable LIM domain-containing serine threonine- kinase DDB_G0287001";Ontology_id "GO:0000166,GO:0006464,GO:0016301";Enzyme_code "EC:2.7.10,EC:2.7.10.2";Enzyme_name "Transferring phosphorus-containing groups,Non-specific protein-tyrosine kinase";
Quercus_rubra_120313_comp31375_c0_seq3
-4.64789806
0.005436428789
"hypothetical protein COLO4_31730";
Quercus_rubra_120313_comp25822_c0_seq1
-1.267158634
0.02650972019
"auxin transporter 2";Ontology_id "GO:0016020";
Quercus_rubra_120313_comp5711_c0_seq1
-1.746215869
0.03114060135
"oxysterol-binding -related 4B";
Quercus_rubra_120313_comp159320_c0_seq1
-4.753153196
0.03416232193
"aldehyde oxidase GLOX-like";Ontology_id "GO:0016020";
Quercus_rubra_120313_comp245899_c0_seq1
-2.311674287
0.03707682807
"pleiotropic drug resistance 2-like";Ontology_id "GO:0000166,GO:0006810,GO:0005886,GO:0005215,GO:0016787";Enzyme_code "EC:3.6.1.3,EC:3.6.1.15";Enzyme_name "Adenosinetriphosphatase,Nucleoside-triphosphate phosphatase";
Quercus_rubra_120313_comp9884_c0_seq1
-7.203144925
0.03707682807
"aquaporin TIP1-3";Ontology_id "GO:0015840,GO:0005887,GO:0009705,GO:0006833,GO:0009992,GO:0015254,GO:0034220,GO:0042807,GO:0015250,GO:0015204";
Quercus_rubra_120313_comp16510_c0_seq1
-1.097987593
0.03779184533
"homeobox knotted-1-like 3 isoform X1";Ontology_id "GO:0005634,GO:0003677,GO:0009058,GO:0006139";
Quercus_rubra_120313_comp18099_c0_seq1
-2.194229434
0.03779184533
"uncharacterized SDCCAG3 family -like";
Quercus_rubra_120313_comp23225_c0_seq1
-1.436417369
0.03779184533
"uncharacterized protein LOC18770571";Ontology_id "GO:0005773";
Quercus_rubra_120313_comp25291_c0_seq1
-1.719762407
0.03779184533
"probable xyloglucan galactosyltransferase GT19";Ontology_id "GO:0006464,GO:0009058,GO:0016740";
Quercus_rubra_120313_comp29287_c0_seq1
-2.197300956
0.03779184533
"histone";Ontology_id "GO:0005634,GO:0003677,GO:0005515";
Quercus_rubra_120313_comp29589_c0_seq7
-1.560996613
0.03779184533
"thioredoxin chloroplastic";Ontology_id "GO:0003824,GO:0009536";Enzyme_code "EC:4.2.1.6";Enzyme_name "Galactonate dehydratase";
Quercus_rubra_120313_comp29400_c1_seq4
-1.809551906
0.03934753275
"beta-amyrin 11-oxidase-like";Ontology_id "GO:0003824,GO:0016020,GO:0008152,GO:0005488";
Quercus_rubra_120313_comp29057_c0_seq1
-1.688573575
0.04113779699
"ABC transporter G family member 11-like";Ontology_id "GO:0005524,GO:0055085,GO:0016021,GO:0015716,GO:0015748,GO:0015416,GO:0005886";Enzyme_code "EC:3.6.1.3,EC:3.6.1.15,EC:3.6.3.28";Enzyme_name "Adenosinetriphosphatase,Nucleoside-triphosphate phosphatase,Phosphonate-transporting ATPase";