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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT5G51600.1
Q9FHM4
31.1
cell.organisation
2.03
cytokinesis by cell plate formation
AT1G08590.1
Q9FRS6
30.2.11
signalling.receptor kinases.leucine rich repeat XI
2.28
protein amino acid phosphorylation
AT3G56705.1
27.1
RNA.processing
2.15
nuclear mRNA cis splicing, via U2-type spliceosome
AT1G18390.1
P0C5E2
30.2.20
signalling.receptor kinases.wheat LRK10 like
3.52
protein amino acid phosphorylation
AT1G30040.2
Q9XFR9
17.6.1.13
hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase
2.51
gibberellic acid catabolic process
AT1G09000.1
O22040
29.4
protein.postranslational modification
2.08
response to oxidative stress
AT3G22142.1
Q9LIE8
26.21
misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
3.11
No GO term
AT4G27260.1
O81829
17.2.3
hormone metabolism.auxin.induced-regulated-responsive-activated
2.13
response to auxin stimulus
AT5G06720.1
Q42578
26.12
misc.peroxidases
2.02
response to oxidative stress
AT1G28400.1
Q9SGN8
35.1
not assigned.no ontology
2.1
biological_process
AT2G02000.1
Q9ZPS4
13.1.1.1.1
amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase
2.4
glutamate decarboxylation to succinate
AT1G08320.3
Q93XM6
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
3.39
regulation of transcription, DNA-dependent
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