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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT5G37850.2
Q8W1X2
3.5
minor CHO metabolism.others
0.46
pyridoxine biosynthetic process
AT3G44160.1
Q5PP51
35.1
not assigned.no ontology
0.48
N-terminal protein myristoylation
AT1G13270.2
Q9FV52
29.5.7
protein.degradation.metalloprotease
0.46
proteolysis
AT3G09600.2
Q8RWU3
27.3.26
RNA.regulation of transcription.MYB-related transcription factor family
0.49
response to salt stress
AT5G37820.1
Q8W036
34.19.99
transport.Major Intrinsic Proteins.unspecified
0.44
transport
AT5G01720.1
Q8RWU5
29.5.11.4.3.2
protein.degradation.ubiquitin.E3.SCF.FBOX
0.49
ubiquitin-dependent protein catabolic process
AT2G01590.1
Q9ZVE7
1.1.6
PS.lightreaction.NADH DH
0.49
biological_process
AT1G16790.1
Q6NQG3
29.2.1.99.99
protein.synthesis.ribosomal protein.unknown.unknown
0.46
biological_process
AT1G72180.1
Q9C7T7
30.2.11
signalling.receptor kinases.leucine rich repeat XI
0.5
protein amino acid phosphorylation
AT2G04360.1
Q29Q44
35.2
not assigned.unknown
0.49
No GO term
AT1G73230.1
Q9CAT7
27.3.67
RNA.regulation of transcription.putative transcription regulator
0.48
biological_process
AT1G01050.1
Q93V56
23.4.99
nucleotide metabolism.phosphotransfer and pyrophosphatases.misc
0.47
metabolic process
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