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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT1G80160.2
A8MS67
24.2
Biodegradation of Xenobiotics.lactoylglutathione lyase
0.49
carbohydrate metabolic process
AT3G53720.1
Q9M353
34.12
transport.metal
0.38
cation transport
AT4G07950.1
Q9ZQC0
27.3.50
RNA.regulation of transcription.General Transcription
0.45
RNA elongation
AT2G46225.1
Q8S8M5
31.1
cell.organisation
0.48
actin nucleation
AT1G08550.1
Q39249
16.1.4.21
secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase
0.48
xanthophyll metabolic process
AT2G15790.1
Q9C566
31.3.1
cell.cycle.peptidylprolyl isomerase
0.5
vegetative phase change
AT1G05160.1
O23051
17.6.1.4
hormone metabolism.gibberelin.synthesis-degradation.ent-kaurenoic acid hydroxylase/oxygenase
0.4
gibberellic acid biosynthetic process
AT1G16120.1
Q9S9M5
30.2.25
signalling.receptor kinases.wall associated kinase
0.37
protein amino acid phosphorylation
AT1G16080.1
Q9S9M7
35.2
not assigned.unknown
0.43
No GO term
AT1G68750.1
Q8GVE8
4.1.15
glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)
0.44
tricarboxylic acid cycle
AT2G46340.1
B9DFX4
30.11
signalling.light
0.47
response to red light
AT4G20760.1
Q9SVH1
26.22
misc.short chain dehydrogenase/reductase (SDR)
0.46
metabolic process
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