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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT1G71810.1
Q94BU1
35.1.1
not assigned.no ontology.ABC1 family protein
0.48
protein amino acid phosphorylation
AT4G12830.1
Q93ZN4
35.1
not assigned.no ontology
0.33
aromatic compound metabolic process
AT4G12830.1
Q93ZN4
35.1
not assigned.no ontology
0.44
aromatic compound metabolic process
AT2G46790.1
Q8L500
27.3.66
RNA.regulation of transcription.Psudo ARR transcription factor family
0.47
circadian rhythm
AT5G39740.1
P49227
29.2.1.2.2.5
protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5
0.43
translation
AT1G59940.1
Q9ZWS9
27.3.5
RNA.regulation of transcription.ARR
0.41
two-component signal transduction system (phosphorelay)
AT2G28470.1
Q9SCV4
26.3.2
misc.gluco-, galacto- and mannosidases.beta-galactosidase
0.47
carbohydrate metabolic process
AT5G13650.2
F4K410
29.2.4
protein.synthesis.elongation
0.44
No GO term
AT5G13650.2
F4K410
29.2.4
protein.synthesis.elongation
0.45
No GO term
AT2G29990.1
O80874
9.2.1.4
mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix
0.43
electron transport
None
#N/A
#N/A
0.44
No GO term
None
#N/A
#N/A
0.46
No GO term
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