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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT2G01275.2
Q6NKQ5
29.5.11.4.2
protein.degradation.ubiquitin.E3.RING
0.42
No GO term
AT1G45616.1
Q9C637
20.1
stress.biotic
0.49
defense response
AT5G02810.1
Q93WK5
27.3.66
RNA.regulation of transcription.Psudo ARR transcription factor family
0.46
circadian rhythm
AT2G07750.1
O80792
27.1.2
RNA.processing.RNA helicase
0.46
No GO term
AT1G26800.1
Q9LQX2
29.5.11.4.2
protein.degradation.ubiquitin.E3.RING
0.3
No GO term
AT5G39830.2
Q9LU10
29.5.5
protein.degradation.serine protease
0.45
proteolysis
AT3G11964.1
F4J8K6
35.1.14
not assigned.no ontology.S RNA-binding domain-containing protein
0.43
RNA processing
None
#N/A
#N/A
0.46
No GO term
AT1G22340.1
Q9LME8
26.2
misc.UDP glucosyl and glucoronyl transferases
0.44
metabolic process
AT5G63920.1
Q9LVP1
28.1
DNA.synthesis/chromatin structure
0.48
DNA topological change
AT3G59200.1
Q9LX51
29.5.11.4.3.2
protein.degradation.ubiquitin.E3.SCF.FBOX
0.37
biological_process
AT1G57770.1
Q9FVR9
16.1.4
secondary metabolism.isoprenoids.carotenoids
0.45
carotenoid biosynthetic process
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