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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT3G15110.1
Q2HIU0
35.2
not assigned.unknown
0.44
biological_process
AT5G18490.1
Q940K1
35.2
not assigned.unknown
0.37
biological_process
None
#N/A
#N/A
0.4
No GO term
AT1G44790.1
Q84QC1
34.14
transport.unspecified cations
0.48
biological_process
AT2G20990.1
Q9SKR2
35.1.19
not assigned.no ontology.C2 domain-containing protein
0.43
biological_process
AT3G53130.1
Q6TBX7
16.1.4.7
secondary metabolism.isoprenoids.carotenoids.carotenoid epsilon ring hydroxylase
0.48
carotenoid biosynthetic process
AT1G70820.1
Q9SSL0
4.2.2
glycolysis.plastid branch.phosphoglucomutase (PGM)
0.46
carbohydrate metabolic process
AT2G36145.1
Q8VXY0
35.2
not assigned.unknown
0.45
biological_process
AT5G32440.1
Q8H1Q3
28.1
DNA.synthesis/chromatin structure
0.46
No GO term
AT5G50160.1
Q8VY13
15.1
metal handling.acquisition
0.49
electron transport
AT4G31115.1
Q8RY26
35.2
not assigned.unknown
0.5
No GO term
AT3G03770.1
Q8LFN2
30.2.6
signalling.receptor kinases.leucine rich repeat VI
0.44
protein amino acid phosphorylation
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