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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: 1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT2G05920.1
Q9ZUF6
29.5.1
protein.degradation.subtilases
2.5
proteolysis
AT4G31500.1
O65782
16.5.1.1.4.1
secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase
2.37
indoleacetic acid biosynthetic process
AT4G31500.1
O65782
16.5.1.1.4.1
secondary metabolism.sulfur-containing.glucosinolates.synthesis.shared.CYP83B1 phenylacetaldoxime monooxygenase
2.25
indoleacetic acid biosynthetic process
AT1G27120.1
Q8GXG6
26.2
misc.UDP glucosyl and glucoronyl transferases
2.15
protein amino acid glycosylation
None
#N/A
#N/A
4.61
No GO term
AT5G20870.1
F4K6W1
26.3
misc.gluco-, galacto- and mannosidases
2.08
carbohydrate metabolic process
AT5G15640.1
Q949U9
34.9
transport.metabolite transporters at the mitochondrial membrane
2.2
mitochondrial transport
AT2G40070.2
Q494P4
35.2
not assigned.unknown
2.15
No GO term
AT3G11660.1
Q9SRN0
20.1
stress.biotic
2
defense response to virus
AT4G21410.1
Q8S9L6
30.2.17
signalling.receptor kinases.DUF 26
2.12
response to abscisic acid stimulus
AT5G64530.1
Q8GWK6
33.99
development.unspecified
2.39
multicellular organismal development
AT1G74030.1
Q9C9C4
4.1.13
glycolysis.cytosolic branch.enolase
2.05
anaerobic respiration
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