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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
None
#N/A
#N/A
0.45
No GO term
AT1G17220.1
Q9SHI1
29.2.3
protein.synthesis.initiation
0.47
translational initiation
AT2G04842.1
F4IFC5
29.1.3
protein.aa activation.threonine-tRNA ligase
0.49
threonyl-tRNA aminoacylation
AT1G68750.1
Q8GVE8
4.1.15
glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)
0.43
tricarboxylic acid cycle
None
#N/A
#N/A
0.5
No GO term
None
#N/A
#N/A
0.38
No GO term
AT4G31210.1
O49571
28.1
DNA.synthesis/chromatin structure
0.48
DNA topological change
AT3G18217.1
32
micro RNA, natural antisense etc
0.45
miRNA-mediated gene silencing
AT4G34830.1
35.1.5
not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
0.5
No GO term
AT4G03100.1
F4JI46
30.5
signalling.G-proteins
0.5
signal transduction
AT5G17050.1
Q9LFJ8
16.8.4.3
secondary metabolism.flavonoids.flavonols.flavonol-3-O-rhamnosyltransferase
0.41
metabolic process
AT2G25737.1
Q8L7A0
35.2
not assigned.unknown
0.46
No GO term
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