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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT3G10740.1
Q9SG80
10.6.2
cell wall.degradation.mannan-xylose-arabinose-fucose
0.47
xylan catabolic process
AT2G20180.1
Q8GZM7
27.3.6
RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
0.49
gibberellic acid biosynthetic process
AT5G15940.1
A0A1P8BEX4
26.22
misc.short chain dehydrogenase/reductase (SDR)
0.48
metabolic process
AT5G28910.1
F4KA27
35.2
not assigned.unknown
0.41
biological_process
AT1G19640.1
Q9AR07
17.7.1.10
hormone metabolism.jasmonate.synthesis-degradation.jasmonate-O-methyltransferase
0.37
jasmonic acid metabolic process
AT1G28650.1
Q3E7I6
11.9.2
lipid metabolism.lipid degradation.lipases
0.5
lipid metabolic process
AT5G03760.1
Q9LZR3
10.2
cell wall.cellulose synthesis
0.5
DNA mediated transformation
AT1G08550.1
Q39249
16.1.4.21
secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase
0.5
xanthophyll metabolic process
AT5G10170.1
Q9LX12
3.4.3
minor CHO metabolism.myo-inositol.InsP Synthases
0.38
myo-inositol biosynthetic process
AT4G34640.1
P53799
11.8.8
lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase
0.49
sterol biosynthetic process
AT3G14690.1
Q9LUC5
26.1
misc.cytochrome P450
0.42
electron transport
AT5G16400.1
Q9XFH9
21.1
redox.thioredoxin
0.48
cell redox homeostasis
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