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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT3G22910.1
Q9LIK7
30.3
signalling.calcium
2.84
calcium ion transport
AT1G29340.1
Q9C7R6
29.5.11.4.2
protein.degradation.ubiquitin.E3.RING
2.28
apoptosis
AT2G30970.1
P46643
13.1.1.2.1
amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase
2.01
amino acid metabolic process
AT5G06720.1
Q42578
26.12
misc.peroxidases
2.81
response to oxidative stress
AT2G29490.1
Q9ZW30
26.9
misc.glutathione S transferases
2.35
toxin catabolic process
AT2G46950.1
F4IK45
26.1
misc.cytochrome P450
2.01
electron transport
AT4G18010.2
Q9FUR2
3.4.1
minor CHO metabolism.myo-inositol.poly-phosphatases
0.49
biological_process
AT1G22340.1
Q9LME8
26.2
misc.UDP glucosyl and glucoronyl transferases
0.4
metabolic process
AT3G03190.1
Q96324
26.9
misc.glutathione S transferases
0.47
response to oxidative stress
AT3G62610.1
Q9LZK4
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
0.48
regulation of transcription, DNA-dependent
AT5G36930.1
F4K5U7
20.1.7
stress.biotic.PR-proteins
0.5
defense response
AT1G04420.1
Q593E6
3.5
minor CHO metabolism.others
0.39
No GO term
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