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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT4G18020.3
Q6LA43
27.3.66
RNA.regulation of transcription.Psudo ARR transcription factor family
0.49
circadian rhythm
AT5G60940.2
Q8L4J2
27.1.3.10
RNA.processing.3' end processing.CstF50
0.48
biological_process
AT1G66330.1
Q9C8Y4
33.99
development.unspecified
0.48
senescence (sensu Magnoliophyta)
AT1G58848.1
P0DI17
20.1
stress.biotic
0.47
defense response
AT1G02170.1
Q7XJE6
29.5
protein.degradation
2.31
induction of apoptosis
AT5G10870.1
Q9S7H4
13.1.6.2.1
amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase
2.43
aromatic amino acid family biosynthetic process
AT1G73650.2
B3H655
35.2
not assigned.unknown
2.27
No GO term
AT3G61040.1
Q9LEX2
26.1
misc.cytochrome P450
2.28
electron transport
AT1G17290.1
F4I7I0
13.1.1.3.1
amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase
2.13
L-alanine catabolic process, by transamination
AT1G22180.2
Q9LM14
29.3.4.99
protein.targeting.secretory pathway.unspecified
2.07
biological_process
AT1G01620.2
Q08733
34.19.1
transport.Major Intrinsic Proteins.PIP
2.42
response to water deprivation
AT3G18280.1
Q9LJQ3
26.21
misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
2.22
lipid transport
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