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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT1G72520.1
Q9FNX8
17.7.1.2
hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
2.34
defense response
AT5G54510.1
Q9LSQ4
17.2.3
hormone metabolism.auxin.induced-regulated-responsive-activated
2.41
unidimensional cell growth
None
#N/A
#N/A
2.24
No GO term
AT4G01960.1
Q9SYJ3
27.3.67
RNA.regulation of transcription.putative transcription regulator
2.11
biological_process
AT1G29860.1
Q93WV4
27.3.32
RNA.regulation of transcription.WRKY domain transcription factor family
2.04
regulation of transcription, DNA-dependent
AT5G43400.1
Q94AE4
35.2
not assigned.unknown
2.68
biological_process
None
#N/A
#N/A
2.14
No GO term
None
#N/A
#N/A
2.34
No GO term
AT2G45290.1
F4IW47
1.3.8
PS.calvin cycle.transketolase
2.34
5-phosphoribose 1-diphosphate biosynthetic process
AT5G62770.1
Q9FM16
35.2
not assigned.unknown
2.15
biological_process
AT4G28950.1
O82480
30.5
signalling.G-proteins
2.03
small GTPase mediated signal transduction
AT4G37900.1
Q9SZJ2
35.1.40
not assigned.no ontology.glycine rich proteins
2.1
biological_process
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