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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
None
#N/A
#N/A
2.75
No GO term
AT2G45440.1
Q9FVC8
13.1.3.5.1
amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate synthase
3.26
lysine biosynthetic process via diaminopimelate
AT2G09990.1
Q9SK22
29.2.1.2.1.16
protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16
2.03
translation
None
#N/A
#N/A
2.22
No GO term
AT4G26620.1
Q9SUA2
2.2.1.99
major CHO metabolism.degradation.sucrose.misc
2.39
biological_process
AT2G39840.1
P48484
29.4
protein.postranslational modification
2.25
protein amino acid dephosphorylation
AT2G31570.1
O04922
21.2.2
redox.ascorbate and glutathione.glutathione
2.03
response to oxidative stress
AT3G22142.1
Q9LIE8
26.21
misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
2.35
No GO term
None
#N/A
#N/A
2.24
No GO term
AT2G45180.1
Q42044
26.21
misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
2.66
lipid transport
AT5G06720.1
Q42578
26.12
misc.peroxidases
2.29
response to oxidative stress
AT5G61590.1
Q9FKG2
17.5.2
hormone metabolism.ethylene.signal transduction
2.9
regulation of transcription, DNA-dependent
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