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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: 1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT3G28860.1
Q9LJX0
34.16
transport.ABC transporters and multidrug resistance systems
2.09
response to blue light
None
#N/A
#N/A
2.28
No GO term
AT5G65380.1
Q9FKQ1
33.99
development.unspecified
2.23
ripening
AT4G23400.1
Q8LAA6
34.19.1
transport.Major Intrinsic Proteins.PIP
2.34
response to salt stress
None
#N/A
#N/A
2.04
No GO term
AT2G29490.1
Q9ZW30
26.9
misc.glutathione S transferases
2.23
toxin catabolic process
AT4G23270.1
Q8GWJ7
30.2.17
signalling.receptor kinases.DUF 26
2.33
protein amino acid phosphorylation
AT4G34770.1
Q9SW57
17.2.3
hormone metabolism.auxin.induced-regulated-responsive-activated
3.51
response to auxin stimulus
AT3G12143.1
10.6.3
cell wall.degradation.pectate lyases and polygalacturonases
2.06
No GO term
AT1G18480.1
Q944L7
26.27
misc.calcineurin-like phosphoesterase family protein
2.11
biological_process
AT2G28660.1
Q7XZS3
15.2
metal handling.binding, chelation and storage
2.31
copper ion transport
AT4G20830.2
Q9SVG4
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
2.38
response to oxidative stress
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