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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
None
#N/A
#N/A
2.11
No GO term
AT5G52400.1
F4KG63
26.1
misc.cytochrome P450
2.07
No GO term
AT2G27380.1
Q9ZQI0
35.1.42
not assigned.no ontology.proline rich family
2.18
cell wall modification (sensu Magnoliophyta)
AT3G11080.1
Q9SRL7
20.1.7
stress.biotic.PR-proteins
2.39
defense response
AT5G13870.1
Q9XIW1
10.7
cell wall.modification
2.45
carbohydrate metabolic process
AT5G45700.1
Q9FK73
26.13
misc.acid and other phosphatases
2.04
No GO term
AT2G02010.1
Q9ZPS3
13.1.1.1.1
amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase
2.39
glutamate decarboxylation to succinate
AT2G02850.1
Q8LG89
26.19
misc.plastocyanin-like
2.57
pollination
AT2G34930.1
O64757
20.1.7
stress.biotic.PR-proteins
2.08
defense response
AT2G29420.1
Q9ZW24
26.9
misc.glutathione S transferases
2.14
toxin catabolic process
AT5G11920.2
Q8W4S6
3.5
minor CHO metabolism.others
2.08
carbohydrate metabolic process
AT1G22490.1
Q9SK91
27.3.6
RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
2.15
regulation of transcription
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