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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT5G63380.1
Q84P23
16.2.1.3
secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL
2.39
jasmonic acid biosynthetic process
AT5G60860.1
Q9FJH0
30.5
signalling.G-proteins
3.56
protein transport
AT2G42380.2
F4IN23
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
2.58
regulation of transcription, DNA-dependent
AT3G13950.1
B9DG91
35.2
not assigned.unknown
2.7
No GO term
AT4G16260.1
Q8VZJ2
26.4.1
misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase
2.89
carbohydrate metabolic process
None
#N/A
#N/A
2.28
No GO term
AT4G05030.1
A0A178UVL2
35.1
not assigned.no ontology
2.18
metal ion transport
AT3G53720.1
Q9M353
34.12
transport.metal
2.5
cation transport
None
#N/A
#N/A
2.23
No GO term
None
#N/A
#N/A
2.7
No GO term
AT4G39070.1
Q0IGM7
27.3.7
RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family
2.24
regulation of transcription
AT1G28260.1
Q9FZ99
35.2
not assigned.unknown
2.38
biological_process
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