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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT1G72330.2
Q9LDV4
13.1.1.3.1
amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase
2.14
biosynthetic process
AT1G21380.1
Q9LPL6
31.4
cell.vesicle transport
2.16
intra-Golgi vesicle-mediated transport
AT3G25250.1
Q9LSF1
29.4
protein.postranslational modification
2.4
protein amino acid phosphorylation
AT2G22250.2
Q9SIE1
13.1.1.2.1
amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase
2.63
embryonic development (sensu Magnoliophyta)
AT3G13610.1
Q9LHN8
28.99
DNA.unspecified
2.11
secondary metabolic process
AT4G33920.1
O81760
29.4
protein.postranslational modification
2
No GO term
AT1G78440.1
Q8LEA2
17.6.1.13
hormone metabolism.gibberelin.synthesis-degradation.GA2 oxidase
2.36
gibberellic acid catabolic process
AT4G03420.1
Q9ZT70
35.2
not assigned.unknown
2.21
biological_process
AT1G44130.1
Q9C6Y5
29.5
protein.degradation
2.03
proteolysis
AT1G15670.1
Q9LMR5
29.5.11.4.3.2
protein.degradation.ubiquitin.E3.SCF.FBOX
3.34
biological_process
AT5G60860.1
Q9FJH0
30.5
signalling.G-proteins
3.11
protein transport
AT2G33490.1
O22799
35.1.41
not assigned.no ontology.hydroxyproline rich proteins
2.04
No GO term
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