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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: ​1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: ​ End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

​

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT5G23950.1
Q9FF85
20.2.2
stress.abiotic.cold
2.29
biological_process
AT1G34300.1
Q9XID3
30.2.24
signalling.receptor kinases.S-locus glycoprotein like
2.02
protein amino acid phosphorylation
AT1G31280.1
Q9SHF3
33.99
development.unspecified
2.06
biological_process
AT4G00880.1
O23089
17.2.3
hormone metabolism.auxin.induced-regulated-responsive-activated
2.26
response to auxin stimulus
AT5G22850.1
Q0WRU5
29.5
protein.degradation
2.13
proteolysis
AT1G51680.3
Q42524
16.2.1.3
secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL
2.41
response to UV
None
#N/A
#N/A
2.28
No GO term
AT5G10870.1
Q9S7H4
13.1.6.2.1
amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase
2.31
aromatic amino acid family biosynthetic process
AT5G61210.1
Q9S7P9
31.4
cell.vesicle transport
2.08
membrane fusion
AT1G28480.1
Q9SGP6
21.4
redox.glutaredoxins
2.17
electron transport
AT1G02170.1
Q7XJE6
29.5
protein.degradation
2.15
induction of apoptosis
AT3G61040.2
Q9LEX2
26.1
misc.cytochrome P450
2.02
electron transport
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