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Species & Dataset

Experiment

Foliar Ozone Injury

  • Medicago truncatula

  • Common name: Barrel clover, Barrel medic

  • Family: Fabaceae

  • Cultivar: Jemalong

  • Tissue: Shoot leaves

  • Ozone concentration: 1.75 times of ambient ozone levels (70 nmol mol-1)

  • Ozone exposure: 6 days (6 hours/day)

  • Sampling time: End of exposure period

  • Platform: Microarray

  • Year of study: 2012

  • Location: Oklahoma, USA

medicago injury.jpg

Title: Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula

 

Summary: Drought and tropospheric ozone are escalating climate change problems that can co-occur. In this study, we observed Medicago truncatula cultivar Jemalong that is sensitive to ozone and drought stress when applied singly,showed tolerance when subjected to a combined application of these stresses. Lowered stomatal conductance may be a vital tolerance mechanism to overcome combined ozone and drought. Sustained increases in both reduced ascorbate and glutathione in response to combined stress may play a role in lowering reactive oxygen species and nitric oxide toxicity. Transcriptome analysis indicated that genes associated with glucan metabolism, responses to temperature and light signalling may play a role in dampening ozone responses due to drought-induced stomatal closure during combined occurrence of these two stresses. Gene ontologies for jasmonic acid signalling and innate immunity were enriched among the 300 differentially expressed genes unique to combined stress. Differential expression of transcription factors associated with redox, defence signalling, jasmonate responses and chromatin modifications may be important for evoking novel gene networks during combined occurrence of drought and ozone. The alterations in redox milieu and distinct transcriptome changes in response to combined stress could aid in tweaking the metabolome and proteome to annul the detrimental effects of ozone and drought in Jemalong.

 

Data repository: MIAMEXPRESS database (http:// www.ebi.ac.uk/miamexpress/) (Accession number E-MEXP-3657)

Reference: Iyer, N.J., Tang, Y. and Mahalingam, R., 2013. Physiological, biochemical and molecular responses to a combination of drought and ozone in Medicago truncatula. Plant, Cell & Environment, 36(3), pp.706-720

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
LogFoldChange
Functional annotation
AT4G30780.1
Q9SUG8
35.2
not assigned.unknown
2.06
biological_process
AT1G47890.1
Q9C699
20.1.7
stress.biotic.PR-proteins
2.09
defense response
AT2G30970.1
P46643
13.1.1.2.1
amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase
2.16
amino acid metabolic process
AT1G75810.1
Q9LQT3
35.2
not assigned.unknown
2.86
biological_process
AT1G29340.1
Q9C7R6
29.5.11.4.2
protein.degradation.ubiquitin.E3.RING
2.3
apoptosis
AT3G55700.1
Q9M052
26.2
misc.UDP glucosyl and glucoronyl transferases
2.2
metabolic process
AT5G01950.1
F4KAX4
30.2.8.1
signalling.receptor kinases.leucine rich repeat VIII.VIII-1
2.49
protein amino acid phosphorylation
AT4G04960.1
Q9S9U1
30.2.19
signalling.receptor kinases.legume-lectin
2.23
protein amino acid phosphorylation
AT4G26620.1
Q9SUA2
2.2.1.99
major CHO metabolism.degradation.sucrose.misc
2.23
biological_process
AT1G20823.1
Q9LM69
29.5.11.4.2
protein.degradation.ubiquitin.E3.RING
2.66
No GO term
AT5G67090.1
Q9FHA4
29.5.1
protein.degradation.subtilases
2.38
proteolysis
AT5G23530.1
Q9LT10
24
Biodegradation of Xenobiotics
2.16
biological_process
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