top of page
Species & Dataset
Experiment
Foliar ozone injury
  • Arabidopsis thaliana

  • Common name: Thale cress, Mouse-ear cress

  • Family: Brassicaceae

  • Cultivar : Columbia (ecotype Col-0)

  • Tissue: Rosettes

  • Ozone concentration: 300 ppb

  • Ozone exposure: 6 hours (0800-1400 h)

  • Platform: Microarray analysis

  • Year of study: 2006

  • Location: Perugia, Italia

Arabidopsis_injury.png

Title:  Gene expression profiles of O3-treated Arabidopsis plants.

 

Summary: To analyse cellular response to O3, the tolerantArabidopsis thaliana genotype Col-0 was exposed to O3 fumigation (300 ppb) for 6 h and the modulation of gene expression during the treatment (3 h after the beginning of the treatment, T3 h) and the recovery phase (6 h from the end of the treatment, T12 h) assessed by gene chip microarray and real-time reverse transcriptase (RT)-PCR analyses. The Arabidopsis transcriptional profile is complex, as new genes (i.e. reticuline oxidase) and pathways, other than those already reported as O3-responsive, appear to be involved in the O3 response. The steady state transcript levels of several WRKY genes were increased in O3-treated plants and the W-box was the cis -element over-represented in the promoter region of T3 h up-regulated genes. The fact that the W-box element was also over-represented in almost all T3 h induced receptor-like kinases (RLKs) suggests a WRKY-mediated control of RLKs under O3 stress and a mechanicistic similarity with the pathogen-induced transcriptional responses. We investigated the molecular and physiological implications of our findings in relation to O3-induced plant stress response.

Reference: Tosti, N., Pasqualini, S., Borgogni, A., Ederli, L., Falistocco, E., Crispi, S. and Paolocci, F., 2006. Gene expression profiles of O3‐treated Arabidopsis plants. Plant, cell & environment, 29(9), pp.1686-1702.

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
FoldChange
Functional annotation
AT2G30070
O22397
34.15
transport.potassium
2.5
high affinity K+ transporter (AtKUP1/AtKT1p) identical to GB:AF029876; supported by cDNA: gi_2654087_gb_AF033118.1_AF033118
AT2G39920
O04195
26.13
misc.acid and other phosphatases
2.2
hypothetical protein predicted by genscan;supported by full-length cDNA: Ceres:33701.
AT2G44370
O64871
35.1.26
not assigned.no ontology.DC1 domain containing protein
2.5
unknown protein highly similar to GP|2435515|AF024504
AT2G19190
O64483
30.2.1
signalling.receptor kinases.leucine rich repeat I
5.3
putative receptor-like protein kinase
AT2G33710
P93007
27.3.3
RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
2.4
putative AP2 domain transcription factor
AT2G02810
O64503
34.11
transport.NDP-sugars at the ER
2.9
unknown protein ;supported by full-length cDNA: Ceres:35441.
AT2G30750
O49340
26.1
misc.cytochrome P450
7.8
putative cytochrome P450
AT2G30770
O49342
26.1
misc.cytochrome P450
9.4
putative cytochrome P450
AT2G32920
O48773
21.1.1
redox.thioredoxin.PDIL
2.1
putative protein disulfide isomerase ; supported by cDNA: gi_15810003_gb_AY054270.1_
AT2G39650
O48813
35.2
not assigned.unknown
2.3
unknown protein
AT2G39660
O48814
29.4.1.57
protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII
3.8
putative protein kinase
AT4G23190
Q9ZP16
30.2.17
signalling.receptor kinases.DUF 26
10.2
serine/threonine kinase - like protein
bottom of page