Species & Dataset
Experiment
Foliar ozone injury
  • Arabidopsis thaliana

  • Common name: Thale cress, Mouse-ear cress

  • Family: Brassicaceae

  • Cultivar : Columbia (ecotype Col-0)

  • Tissue: Rosettes

  • Ozone concentration: 300 ppb

  • Ozone exposure: 6 hours (0800-1400 h)

  • Platform: Microarray analysis

  • Year of study: 2006

  • Location: Perugia, Italia

Arabidopsis_injury.png

Title:  Gene expression profiles of O3-treated Arabidopsis plants.

 

Summary: To analyse cellular response to O3, the tolerantArabidopsis thaliana genotype Col-0 was exposed to O3 fumigation (300 ppb) for 6 h and the modulation of gene expression during the treatment (3 h after the beginning of the treatment, T3 h) and the recovery phase (6 h from the end of the treatment, T12 h) assessed by gene chip microarray and real-time reverse transcriptase (RT)-PCR analyses. The Arabidopsis transcriptional profile is complex, as new genes (i.e. reticuline oxidase) and pathways, other than those already reported as O3-responsive, appear to be involved in the O3 response. The steady state transcript levels of several WRKY genes were increased in O3-treated plants and the W-box was the cis -element over-represented in the promoter region of T3 h up-regulated genes. The fact that the W-box element was also over-represented in almost all T3 h induced receptor-like kinases (RLKs) suggests a WRKY-mediated control of RLKs under O3 stress and a mechanicistic similarity with the pathogen-induced transcriptional responses. We investigated the molecular and physiological implications of our findings in relation to O3-induced plant stress response.

Reference: Tosti, N., Pasqualini, S., Borgogni, A., Ederli, L., Falistocco, E., Crispi, S. and Paolocci, F., 2006. Gene expression profiles of O3‐treated Arabidopsis plants. Plant, cell & environment, 29(9), pp.1686-1702.

AGI Gene Code
Uniprot ID
Bin Code
Bin Name
FoldChange
Functional annotation
AT1G30710
Q9SA86
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c
putative reticuline oxidase-like protein similar to GB:P30986 from [Eschscholzia californica] ( berberine bridge-forming enzyme ), ESTs gb|F19886, gb|Z30784 and gb|Z30785 come from this gene
AT1G30720
Q9SA87
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
2.8
putative reticuline oxidase-like protein similar to GB:P30986 from [Eschscholzia californica] ( berberine bridge-forming enzyme ), ESTs gb|F19886, gb|Z30784 and gb|Z30785 come from this gene
AT1G30740
Q9SA89
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c
putative reticuline oxidase-like protein similar to GB:P30986 from [Eschscholzia californica] ( berberine bridge-forming enzyme ), ESTs gb|F19886, gb|Z30784 and gb|Z30785 come from this gene
AT1G30700
Q9SA85
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c.
putative reticuline oxidase-like protein similar to GB:P30986 from [Eschscholzia californica] ( berberine bridge-forming enzyme ), ESTs gb|F19886, gb|Z30784 and gb|Z30785 come from this gene; supported by cDNA: gi_16930506_gb_AF419607.1_AF419607
AT1G30760
Q93ZA3
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c
putative reticuline oxidase-like protein similar to GB:P30986 from [Eschscholzia californica] ( berberine bridge-forming enzyme ), ESTs gb|F19886, gb|Z30784 and gb|Z30785 come from this gene
AT3G28450
Q9LSI9
30.2.10
signalling.receptor kinases.leucine rich repeat X
1.7
receptor kinase
AT2G20850
Q06BH3
30.2.5
signalling.receptor kinases.leucine rich repeat V
1.8
putative LRR receptor protein kinase
AT1G49730
Q9FX99
30.2.99
signalling.receptor kinases.misc
1.7
hypothetical protein
AT1G69270
Q9ZRF9
30.2.99
signalling.receptor kinases.misc
n.c.
receptor protein kinase, putative
AT2G32680
O48849
20.1.7
stress.biotic.PR-proteins
n.c.
putative disease resistance protein
AT5G67280
Q9FGQ5
30.2.3
signalling.receptor kinases.leucine rich repeat III
n.c.
receptor-like protein kinase
AT4G02420
O81291
30.2.19
signalling.receptor kinases.legume-lectin
n.c.
not found
AT4G13900
Q9SVM3
35.2
not assigned.unknown
n.c.
putative disease resistance protein
AT4G23290
Q3E9X6
30.2.17
signalling.receptor kinases.DUF 26
n.c.
serine/threonine kinase - like protein
AT3G56370
Q9LY03
30.2.7
signalling.receptor kinases.leucine rich repeat VII
-2.5
putative protein
AT3G45640
Q39023
30.6
signalling.MAP kinases
2
MPK3, mitogen-activated protein kinase 3 ; supported by cDNA: gi_14423447_gb_AF386961.1_AF386961
AT1G01560
Q9LMM5
30.6
signalling.MAP kinases
3
MPK11, MAP kinase, putative similar to MAP kinase 5 GI:4239889 from [Zea mays]
AT4G29810
Q9S7U9
29.4.1
protein.postranslational modification.kinase
1.8
MKK2, MAP kinase kinase 2 ; supported by cDNA: gi_14326470_gb_AF385688.1_AF385688
AT4G26070
Q94A06
30.6
signalling.MAP kinases
1.7
MKK1, mitogen activated protein kinase kinase (nMAPKK) ;supported by full-length cDNA: Ceres:31259.
AT5G03730
Q05609
29.4
protein.postranslational modification
1.9
SERINE/THREONINE-PROTEIN KINASE CTR1
AT5G67080
Q9FHA5
29.4
protein.postranslational modification
6.6
protein kinase-like protein, MAPKKK19
AT5G66850
Q9C5H5
30.6
signalling.MAP kinases
2.4
MAP protein kinase, MAPKKK5 ; supported by cDNA: gi_13430659_gb_AF360242.1_AF360242
AT2G31800
Q9SKC0
29.4
protein.postranslational modification
2.6
RAF23, putative protein kinase contains a protein kinase domain profile (PDOC00100)
AT5G57610
Q9FKL3
29.4
protein.postranslational modification
n.c.
RAF35, putative protein contains similarity to protein kinase, RAF23
AT3G46930
A0A1I9LS71
29.4
protein.postranslational modification
2.2
RAF43, protein kinase 6-like protein protein kinase 6 - Glycine max,PIR2:S29851
AT3G04910
Q9CAV6
29.4.1
protein.postranslational modification.kinase
n.c.
ZIK4, putative mitogen activated protein kinase kinase similar to mitogen activated protein kinase kinase GB:AAC32599 [Oryza sativa]
AT3G18750
Q8S8Y8
29.4
protein.postranslational modification
n.c.
ZIK5, mitogen activated protein kinase kinase, putative similar to mitogen activated protein kinase kinase GB:AAC32599 from [Oryza sativa]
AT5G41990
Q944Q0
30.6
signalling.MAP kinases
2
ZIK6, MAP kinase ; supported by cDNA: gi_15983508_gb_AF424629.1_AF424629
AT5G55560
Q6ICW6
29.4
protein.postranslational modification
2
ZIK8, putative protein contains similarity to NRK-related kinase
AT1G42990
Q9C7S0
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
1.8
bZIP transcription factor, putative contains Pfam profile: PF00170: bZIP transcription factor; supported by cDNA: gi_15028322_gb_AY045964.1_
AT3G54620
Q9M1G6
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
2
Expressed protein ; supported by cDNA: gi_15451129_gb_AY054645.1_
AT1G22070
Q39234
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
2.7
transcription factor identical to transcription factor GI:304113 from [Arabidopsis thaliana];supported by full-length cDNA: Ceres:33016.
AT3G58120
Q9M2K4
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
n.c.
putative protein basic leucine zipper transcription activator shoot-forming PKSF1 - Paulownia kawakamii, EMBL:AF046934;supported by full-length cDNA: Ceres:34553.
AT1G06850
Q8VWG0
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
n.c.
b-Zip DNA binding protein, putative similar to b-Zip DNA binding protein GB:CAB06697 GI:2246376 from [Arabidopsis thaliana]
AT2G18160
Q9SI15
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
-2.2
putative bZIP transcription factor contains a bZIP transcription factor basic domain signature (PDOC00036); supported by cDNA: gi_14335073_gb_AY037216.1_
AT5G15830
#N/A
27.3.35
RNA.regulation of transcription.bZIP transcription factor family
-3.4
bZIP DNA-binding protein-like putative bZIP DNA-binding protein - Capsicum chinense, EMBL:AF127797
AT1G18570
O49782
16.5.1.2.3
secondary metabolism.sulfur-containing.glucosinolates.regulation.indole
7.1
myb factor, putative similar to myb factor GI:1946266 from [Oryza sativa]; supported by cDNA: gi_3941465_gb_AF062887.1_AF062887
AT1G06180
Q9LNC9
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
2.3
MYB-related protein identical to GB:CAA90748 GI:1263093 from [Arabidopsis thaliana]
AT3G23250
Q9LTC4
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
5.9
myb-related transcription factor, putative similar to myb-related transcription factor GB:CAA66952 from [Lycopersicon esculentum]
AT1G66230
Q9C7U7
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
1.7
myb-related transcription factor, putative similar to GI:1430846 from [Lycopersicon esculentum]
AT5G15310
Q9LXF1
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
-2.5
myb-related protein - like myb-related protein 1, garden petunia, PIR:S26605
AT5G67300
Q9FDW1
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
-1.7
myb-related protein, 33.3K (pir |S71284) ;supported by full-length cDNA: Ceres:33763.
AT3G46130
Q9LX82
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
-2.5
Myb DNA binding protein -like MYB59, Arabidopsis thaliana, EMBL:AF062894; supported by cDNA: gi_9864078_gb_AF272733.1_AF272733
AT5G59780
Q4JL84
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
n.c.
MYB27 protein - like MYB27 protein, Arabidopsis thaliana, PIR:T46166; supported by cDNA: gi_3941479_gb_AF062894.1_AF062894
AT1G74430
A0A1P8APC6
27.3.25
RNA.regulation of transcription.MYB domain transcription factor family
n.c.
putative MYB family transcription factor contains Pfam profile: PF00249 Myb-like DNA-binding domain; similar to N-term of myb GB:CAA72218 [Oryza sativa]; supported by cDNA: gi_15375287_gb_AF217205.2_AF217205
AT4G20820
Q9SVG5
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c
reticuline oxidase - like protein reticuline oxidase (EC 1.5.3.9) precursor, Eschscholzia californica, PIR2:A41533
AT4G20840
Q9SVG3
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c
reticuline oxidase - like protein reticuline oxidase precursor, Eschscholzia californica, PIR:A41533
AT4G20830
Q9SVG4
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
5.9
reticuline oxidase -like protein reticuline oxidase, Eschscholzia californica, PIR:A41533; supported by cDNA: gi_15983492_gb_AF424621.1_AF424621
AT1G26420
Q9FZC8
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
16
hypothetical protein similar to reticuline oxidase-like protein GB:CAB45850 GI:5262224 from [Arabidopsis thaliana]
AT1G26410
Q9FZC7
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
6.7
unknown protein similar to reticuline oxidase-like protein GB:CAB45850 GI:5262224 from [Arabidopsis thaliana]
AT1G26400
Q9FZC6
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c
hypothetical protein similar to reticuline oxidase-like protein GB:CAB45849 GI:5262223 from [Arabidopsis thaliana]
AT1G26390
Q9FZC5
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
3.8
hypothetical protein similar to reticuline oxidase-like protein GB:CAB45850 GI:5262224 from [Arabidopsis thaliana]; supported by cDNA: gi_15293132_gb_AY051000.1_
AT1G26380
Q9FZC4
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
23.4
hypothetical protein similar to reticuline oxidase-like protein GB:CAB45850 GI:5262224 from [Arabidopsis thaliana]; supported by cDNA: gi_13430839_gb_AF360332.1_AF360332
AT1G01980
Q9LPC3
26.8
misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
n.c
hypothetical protein similar to reticuline oxidase-like protein GB:CAB45849 GI:5262223 from [Arabidopsis thaliana]
AT1G11770
Q9SA99
16.4.1
secondary metabolism.N misc.alkaloid-like
n.c
putative reticuline oxidase strong similarity to gb|AF049347 berberine bridge enzyme from Berberis stolonifera
AT2G30990
F4IPV3
35.2
not assigned.unknown
2
hypothetical protein predicted by genefinder
AT2G44040
O80574
13.1.3.5.2
amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase
2.5
unknown protein ;supported by full-length cDNA: Ceres:10293.
AT2G30250
O22921
27.3.32
RNA.regulation of transcription.WRKY domain transcription factor family
2
putative WRKY-type DNA binding protein ; supported by cDNA: gi_15027912_gb_AY045813.1_
AT2G22970
Q2V465
29.5.5
protein.degradation.serine protease
2.8
putative serine carboxypeptidase II ; supported by cDNA: gi_14517521_gb_AY039596.1_
AT2G23770
O64825
30.2.21
signalling.receptor kinases.lysine motif
2.2
putative protein kinase contains a protein kinase domain profile (PDOC00100)
AT2G30070
O22397
34.15
transport.potassium
2.5
high affinity K+ transporter (AtKUP1/AtKT1p) identical to GB:AF029876; supported by cDNA: gi_2654087_gb_AF033118.1_AF033118
AT2G39920
O04195
26.13
misc.acid and other phosphatases
2.2
hypothetical protein predicted by genscan;supported by full-length cDNA: Ceres:33701.
AT2G44370
O64871
35.1.26
not assigned.no ontology.DC1 domain containing protein
2.5
unknown protein highly similar to GP|2435515|AF024504
AT2G19190
O64483
30.2.1
signalling.receptor kinases.leucine rich repeat I
5.3
putative receptor-like protein kinase
AT2G33710
P93007
27.3.3
RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
2.4
putative AP2 domain transcription factor
AT2G02810
O64503
34.11
transport.NDP-sugars at the ER
2.9
unknown protein ;supported by full-length cDNA: Ceres:35441.
AT2G30750
O49340
26.1
misc.cytochrome P450
7.8
putative cytochrome P450
AT2G30770
O49342
26.1
misc.cytochrome P450
9.4
putative cytochrome P450
AT2G32920
O48773
21.1.1
redox.thioredoxin.PDIL
2.1
putative protein disulfide isomerase ; supported by cDNA: gi_15810003_gb_AY054270.1_
AT2G39650
O48813
35.2
not assigned.unknown
2.3
unknown protein
AT2G39660
O48814
29.4.1.57
protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII
3.8
putative protein kinase
AT4G23190
Q9ZP16
30.2.17
signalling.receptor kinases.DUF 26
10.2
serine/threonine kinase - like protein
AT3G55950
Q9LY50
30.2.26
signalling.receptor kinases.crinkly like
6.6
receptor kinase - like protein
AT1G51890
C0LGG6
30.2.99
signalling.receptor kinases.misc
7.4
light repressible receptor protein kinase, putative
AT1G51800
Q9C8I6
30.2.99
signalling.receptor kinases.misc
6.3
hypothetical protein
AT2G19190
O64483
30.2.1
signalling.receptor kinases.leucine rich repeat I
5.3
putative receptor-like protein kinase
AT1G09970
F4I2N7
30.2.11
signalling.receptor kinases.leucine rich repeat XI
5
unknown protein
AT5G25930
Q9XGZ2
30.2.11
signalling.receptor kinases.leucine rich repeat XI
5
receptor-like protein kinase - like
AT4G23280
O65479
30.2.17
signalling.receptor kinases.DUF 26
5.2
serine /threonine kinase - like protein
AT1G79680
Q8VYA3
30.2.25
signalling.receptor kinases.wall associated kinase
4.6
wall-associated kinase 2, putative
AT4G21400
O65405
30.2.17
signalling.receptor kinases.DUF 26
2.7
serine/threonine protein kinase - like protein
AT1G21240
Q9LMN8
30.2.25
signalling.receptor kinases.wall associated kinase
3.9
hypothetical protein
AT5G01540
Q9M021
30.2.99
signalling.receptor kinases.misc
3.2
receptor like protein kinase
AT5G46330
Q9FL28
30.2.12
signalling.receptor kinases.leucine rich repeat XII
2.9
receptor protein kinase - like protein
AT4G23210
Q0PW40
30.2.17
signalling.receptor kinases.DUF 26
2.9
serine/threonine kinase - like protein
AT3G47090
Q9SD64
30.2.12
signalling.receptor kinases.leucine rich repeat XII
2.5
receptor kinase-like protein
AT4G04220
F4JGB6
20.1.7
stress.biotic.PR-proteins
2.4
putative disease resistance protein
AT4G23220
Q8H199
30.2.17
signalling.receptor kinases.DUF 26
2.8
serine/threonine kinase - like protein
AT3G53810
Q9M345
30.2.19
signalling.receptor kinases.legume-lectin
2.6
serine/threonine-specific kinase like protein
AT4G29050
Q9SZD5
30.2.19
signalling.receptor kinases.legume-lectin
2
serine/threonine-specific kinase like protein
AT4G33430
Q94F62
17.3.2.99
hormone metabolism.brassinosteroid.signal transduction.other
2.4
somatic embryogenesis receptor-like kinase -like protein
AT1G53430
C0LGG8
30.2.8.2
signalling.receptor kinases.leucine rich repeat VIII.VIII-2
2.4
receptor-like serine/threonine kinase, putative
AT1G73080
Q9SSL9
30.2.11
signalling.receptor kinases.leucine rich repeat XI
1.9
hypothetical protein
AT1G53440
C0LGG9
30.2.8.2
signalling.receptor kinases.leucine rich repeat VIII.VIII-2
2.3
receptor-like serine/threonine kinase
AT1G70530
Q9CAL2
30.2.17
signalling.receptor kinases.DUF 26
2.4
putative protein kinase
AT5G01950
F4KAX4
30.2.8.1
signalling.receptor kinases.leucine rich repeat VIII.VIII-1
2.2
putative protein
AT3G28890
Q9LJW7
20.1
stress.biotic
2
disease resistance protein
AT3G59700
Q96285
30.2.19
signalling.receptor kinases.legume-lectin
2.3
serine/threonine-specific kinase lecRK1 precursor
AT4G04490
Q9XEC6
30.2.17
signalling.receptor kinases.DUF 26
2.3
putative receptor-like protein kinase
AT1G11050
O04086
30.2.23
signalling.receptor kinases.RKF3 like
2.5
Ser/Thr protein kinase isolog
AT4G23250
Q8L710
30.2.17
signalling.receptor kinases.DUF 26
1.8
protein kinase - like protein
AT1G51790
F4IB60
30.2.99
signalling.receptor kinases.misc
1.7
hypothetical protein
AT4G04960
Q9S9U1
30.2.19
signalling.receptor kinases.legume-lectin
1.9
not found
AT4G23230
Q8W4G6
30.2.17
signalling.receptor kinases.DUF 26
2.1
putative protein
AT5G65240
C0LGX1
30.2.2
signalling.receptor kinases.leucine rich repeat II
2.3
receptor-like protein kinase
AT2G24180
O65787
26.1
misc.cytochrome P450
2.1
putative cytochrome P450 identical to GB:D78604; supported by cDNA: gi_15450907_gb_AY054534.1_
AT2G37430
Q9SLD4
27.3.11
RNA.regulation of transcription.C2H2 zinc finger family
5
putative C2H2-type zinc finger protein likely a nucleic acid binding protein
AT2G18690
Q9ZV49
35.2
not assigned.unknown
5.2
unknown protein ; supported by cDNA: gi_14517479_gb_AY039575.1_
AT2G40740
Q9SHB5
27.3.32
RNA.regulation of transcription.WRKY domain transcription factor family
4.4
putative WRKY-type DNA binding protein
AT2G18660
Q9ZV52
10.7
cell wall.modification
2
hypothetical protein predicted by genscan
AT2G18680
Q9ZV50
35.2
not assigned.unknown
5.2
unknown protein
AT2G37940
Q9SH93
35.2
not assigned.unknown
4.3
unknown protein ; supported by cDNA: gi_16604321_gb_AY058059.1_
AT2G28080
Q9ZUV0
26.2
misc.UDP glucosyl and glucoronyl transferases
2.8
putative glucosyltransferase ; supported by full-length cDNA: Ceres: 13761.
AT2G38860
Q9ZV19
33.99
development.unspecified
4
unknown protein ;supported by full-length cDNA: Ceres:114031.
AT2G02370
Q9ZVQ5
35.2
not assigned.unknown
2.3
hypothetical protein predicted by genscan and genefinder; supported by cDNA: gi_13605570_gb_AF361611.1_AF361611
AT2G02410
Q9ZVQ1
35.2
not assigned.unknown
2.9
hypothetical protein predicted by genscan
AT2G28760
Q9ZV36
10.1.5
cell wall.precursor synthesis.UXS
2.5
putative nucleotide-sugar dehydratase
AT2G28840
Q94B55
31.1
cell.organisation
3
putative RING zinc finger ankyrin protein ; supported by cDNA: gi_13926221_gb_AF370581.1_AF370581
AT2G02220
Q9ZVR7
30.2.10
signalling.receptor kinases.leucine rich repeat X
4.1
putative protein kinase
AT2G02340
Q9ZVQ8
31.1
cell.organisation
2.1
putative phloem-specific lectin
AT2G02350
Q9FV02
31.1
cell.organisation
2.9
SKP1 interacting partner 3 (SKIP3), putative almost identical to SKP1 interacting partner 3 GI:10716951 from [Arabidopsis thaliana]
AT2G02360
Q9ZVQ6
29.5.11.4.3.2
protein.degradation.ubiquitin.E3.SCF.FBOX
2.2
putative phloem-specific lectin
AT2G29460
Q9ZW27
26.9
misc.glutathione S transferases
9.5
putative glutathione S-transferase ; supported by cDNA: gi_14423533_gb_AF387004.1_AF387004
AT2G29470
Q9ZW28
26.9
misc.glutathione S transferases
3.4
putative glutathione S-transferase ; supported by cDNA: gi_11096003_gb_AF288185.1_AF288185
AT2G29410
Q6DBM8
34.12
transport.metal
2.7
putative zinc transporter
AT2G32380
Q9ZV66
35.2
not assigned.unknown
2.3
hypothetical protein predicted by genefinder;supported by full-length cDNA: Ceres:9671.
AT2G32250
Q3EBQ3
28.99
DNA.unspecified
2.4
Mutator-like transposase similar to MURA transposase of maize Mutator transposon
AT2G41380
Q9ZVC3
33.99
development.unspecified
2.1
putative embryo-abundant protein
AT2G43160
#N/A
35.1.21
not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein
2.4
putative clathrin binding protein (epsin)
AT2G06925
Q8S8N6
11.9.3.4
lipid metabolism.lipid degradation.lysophospholipases.phospholipase A2
2.3
Expressed protein ; supported by full-length cDNA: Ceres: 7600.
AT2G16900
Q9ZVX3
35.2
not assigned.unknown
3.9
hypothetical protein predicted by genefinder; supported by cDNA: gi_14532491_gb_AY039870.1_
AT2G23830
O82213
35.1
not assigned.no ontology
2.1
unknown protein
AT2G46140
O82355
33.2
development.late embryogenesis abundant
2.9
putative desiccation related protein ; supported by full-length cDNA: Ceres: 2747.
AT2G29720
O82384
26.7
misc.oxidases - copper, flavone etc
2.1
putative monooxygenase ;supported by full-length cDNA: Ceres:34214.
AT2G25735
Q8RUI1
35.2
not assigned.unknown
4
Expressed protein ; supported by full-length cDNA: Ceres: 7152.
AT2G25850
O82312
27.1.3.1
RNA.processing.3' end processing.PAP
2.1
putative poly(A) polymerase ; supported by cDNA: gi_14532699_gb_AY039974.1_
AT2G02930
Q9SLM6
26.9
misc.glutathione S transferases
2.6
putative glutathione S-transferase ;supported by full-length cDNA: Ceres:27915.; supported by cDNA: gi_11095995_gb_AF288181.1_AF288181
AT2G47000
O80725
34.16
transport.ABC transporters and multidrug resistance systems
2.1
putative ABC transporter related to multi drug resistance proteins and P-glycoproteins
AT2G47130
O80713
26.22
misc.short chain dehydrogenase/reductase (SDR)
2.2
putative alcohol dehydrogenase
AT2G29100
O81078
30.1
signalling.in sugar and nutrient physiology
2.1
putative ligand-gated ion channel protein
AT2G22860
O81003
33.99
development.unspecified
3.2
unknown protein
AT2G22880
O81005
35.1
not assigned.no ontology
2.4
hypothetical protein predicted by genefinder
AT2G29990
O80874
9.2.1.4
mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix
2.8
putative NADH dehydrogenase (ubiquinone oxidoreductase)
AT2G26150
O80982
20.2.1
stress.abiotic.heat
4.1
putative heat shock transcription factor
AT2G44790
O80517
26.19
misc.plastocyanin-like
4.7
phytocyanin identical to GB:U90428; supported by full-length cDNA: Ceres: 19760.
AT2G18950
Q8VWJ1
16.1.3.2
secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase
2.5
hypothetical protein predicted by genefinder
AT2G39480
Q8LPT1
34.16
transport.ABC transporters and multidrug resistance systems
3
putative ABC transporter related to multi drug resistance proteins and P-glycoproteins
AT2G39400
O80627
11.9.2.2
lipid metabolism.lipid degradation.lipases.acylglycerol lipase
4
putative phospholipase ; supported by cDNA: gi_14532651_gb_AY039950.1_
AT2G39210
O80960
33.99
development.unspecified
2.8
nodulin-like protein ; supported by cDNA: gi_16930478_gb_AF419593.1_AF419593
AT2G34500
O64697
26.1
misc.cytochrome P450
5.7
putative cytochrome P450
AT2G38470
Q8S8P5
27.3.32
RNA.regulation of transcription.WRKY domain transcription factor family
4.2
putative WRKY-type DNA binding protein
AT2G41160
Q8RXQ2
29.5.11
protein.degradation.ubiquitin
2.1
unknown protein
AT2G41100
P25071
30.3
signalling.calcium
2.5
calmodulin-like protein identical to GB:D45848; supported by cDNA: gi_15983405_gb_AF424577.1_AF424577
AT2G38290
Q9M6N7
34.5
transport.ammonium
3.4
putative ammonium transporter
AT2G30870
P42761
26.9
misc.glutathione S transferases
3
glutathione S-transferase identical to GB:D17673; supported by cDNA: gi_443698_dbj_D17673.1_ATHERD13
AT1G10070
Q9M439
13.1.4.1.4
amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase
2.3
tat-binding protein, putative Highly Similar to branched-chain amino acid aminotransferase; Location of EST gb|T44177 and gb|AA395381; supported by cDNA: gi_15293208_gb_AY051038.1_
AT2G17720
Q24JN5
26.7
misc.oxidases - copper, flavone etc
2.4
putative prolyl 4-hydroxylase, alpha subunit ;supported by full-length cDNA: Ceres:36054.
AT2G17740
Q6NQN8
35.1.26
not assigned.no ontology.DC1 domain containing protein
2.5
unknown protein
AT1G08930
O04036
34.2
transport.sugars
2.5
zinc finger protein ATZF1, putative identical to GB:BAA25989; supported by cDNA: gi_3123711_dbj_D89051.1_D89051
AT1G08940
O04035
4.1.12
glycolysis.cytosolic branch.phosphoglycerate mutase
3.9
unknown protein Similar to Saccharomyces hypothetical protein YDR051c (gb|Z49209). ESTs gb|T44436,gb|42252 come from this gene
AT1G09970
F4I2N7
30.2.11
signalling.receptor kinases.leucine rich repeat XI
5
unknown protein Similar to A. thaliana receptor-like protein kinase (gb|RLK5_ARATH). ESTs gb|ATTS0475,gb|ATTS4362 come from this gene
AT1G62300
Q9C519
27.3.32
RNA.regulation of transcription.WRKY domain transcription factor family
5.8
unknown protein similar to putative DNA-binding protein GI:7268215 from [Arabidopsis thaliana]; supported by cDNA: gi_12658409_gb_AF331712.1_AF331712
AT1G61370
O64783
29.4
protein.postranslational modification
3.9
receptor protein kinase (IRK1), putative similar to receptor protein kinase (IRK1) GI:836953 from [Ipomoea trifida]
AT1G61360
O64784
29.4
protein.postranslational modification
4.5
receptor protein kinase (IRK1), putative similar to receptor protein kinase (IRK1) GI:836953 from [Ipomoea trifida]
AT1G61420
O64778
29.4
protein.postranslational modification
2.4
receptor kinase, putative similar to receptor kinase GI:166692 from [Arabidopsis thaliana]
AT1G61380
O64782
30.2.24
signalling.receptor kinases.S-locus glycoprotein like
3.9
hypothetical protein similar to putative serine/threonine kinase GI:4585880 from [Arabidopsis thaliana];supported by full-length cDNA: Ceres:13461.
AT1G22900
Q67YM6
20.1
stress.biotic
3
putative disease resistance response protein similar to GB:AAD29806
AT1G22890
A0JQ18
35.2
not assigned.unknown
3.4
unknown protein
AT1G03740
Q9LR53
29.4
protein.postranslational modification
2.7
putative protein kinase similar to (Z71703), cdc2-like protein kinase; similar to ESTs gb|T20748, gb|T20464, and emb|Z17761; supported by cDNA: gi_14532735_gi_13430451
AT1G24140
Q5XF51
29.5.7
protein.degradation.metalloprotease
2.7
putative metalloproteinase similar to GB:AAB61099
AT1G24150
O48682
31.1
cell.organisation
2.1
unknown protein
AT1G61250
Q9M5P2
34.99
transport.misc
2.7
secretory carrier membrane protein identical to secretory carrier membrane protein GI:7109228 from [Arabidopsis thaliana];supported by full-length cDNA: Ceres:27197.
AT1G23090
Q9SXS2
34.6
transport.sulphate
2.2
putative sulphate transporter protein strongly similar to GB:BAA75015, location of EST gb|W43788 and gb|N96564; supported by cDNA: gi_4579912_dbj_AB023423.1_AB023423
AT1G60730
Q9ASZ9
17.2.3
hormone metabolism.auxin.induced-regulated-responsive-activated
2.7
auxin-induced protein, putative similar to auxin-induced atb2 GI:6562980 from [Arabidopsis thaliana]; supported by cDNA: gi_13605500_gb_AF361576.1_AF361576
AT1G76930
Q38913
10.5.4
cell wall.cell wall proteins.HRGP
2.4
hypothetical protein contains similarity to extensin GI:1165127 from [Nicotiana sylvestris]; supported by cDNA: gi_12248385_dbj_AB031820.1_AB031820
AT1G61560
Q94KB7
20.1.3.1
stress.biotic.signalling.MLO-like
5.6
Mlo protein, putative similar to Mlo protein GI:1877220 from [Hordeum vulgare]; supported by cDNA: gi_14091581_gb_AF369567.1_AF369567
AT1G52140
Q9ZU12
35.2
not assigned.unknown
2.2
unknown protein ;supported by full-length cDNA: Ceres:25812.
AT1G52040
Q9SAV0
16.5.1.3.1
secondary metabolism.sulfur-containing.glucosinolates.degradation.myrosinase
2.7
myrosinase-binding protein homolog, putative almost identical to myrosinase-binding protein homolog GI:2997767 from [Arabidopsis thaliana]; supported by cDNA: gi_13937207_gb_AF372958.1_AF372958
AT1G03850
Q84TF4
21.4
redox.glutaredoxins
3.5
hypothetical protein predicted by genefinder;supported by full-length cDNA: Ceres:271253.
AT1G55450
Q9ZVU4
33.99
development.unspecified
2.6
hypothetical protein similar to embryo-abundant protein GB:L47672 GI:1350530 from [Picea glauca]; supported by cDNA: gi_14335021_gb_AY037190.1_
AT1G05010
Q06588
17.5.1.2
hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate oxidase
3.6
1-aminocyclopropane-1-carboxylate oxidase Identical to 1-aminocyclopropane-1-carboxylate oxidase (ACC oxidase) gb|X66719 (EAT1). ESTs gb|T43073, gb|T5714, gb|R90435, gb|R44023, gb|AA597926, gb|AI099676, gb|AA650810 and gb|29725 come from this gene
AT2G02010
Q9ZPS3
13.1.1.1.1
amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase
9.1
putative glutamate decarboxylase ; supported by cDNA: gi_13605709_gb_AF361836.1_AF361836
AT2G43000
Q9SK55
33.99
development.unspecified
4
NAM (no apical meristem)-like protein
AT2G06510
Q9SKI4
29.5
protein.degradation
2
putative replication protein A1
AT2G20900
Q9C5E5
11.3.5
lipid metabolism.Phospholipid synthesis.diacylglycerol kinase
2.1
putative diacylglycerol kinase ;supported by full-length cDNA: Ceres:15863.
AT2G20960
Q67YW6
35.1
not assigned.no ontology
2.1
pEARLI 4 protein Same as GB: L43081; supported by cDNA: gi_871781_gb_L43081.1_ATHPEARA
AT2G46620
F4IJ77
29.5.9
protein.degradation.AAA type
3.1
hypothetical protein predicted by genefinder
AT2G15480
Q9ZQG4
26.2
misc.UDP glucosyl and glucoronyl transferases
2.6
putative glucosyltransferase
AT2G06050
Q9FUP0
17.7.1.5
hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase
2.5
12-oxophytodienoate-10,11-reductase ; supported by cDNA: gi_15294261_gb_AF410322.1_AF410322
AT2G28210
F4IHR4
8.3
TCA / org transformation.carbonic anhydrases
3.8
putative carbonic anhydrase
AT2G20145
#N/A
#N/A
#N/A
2.4
Expressed protein ; supported by cDNA: gi_13605516_gb_AF361584.1_AF361584
AT2G27310
Q9XIN8
29.5.11.4.3.2
protein.degradation.ubiquitin.E3.SCF.FBOX
2.1
unknown protein
AT2G13810
Q9ZQI7
13.1.6.2
amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine
2.5
putative aspartate aminotransferase ; supported by cDNA: gi_15982837_gb_AY057526.1_
AT2G25470
Q9SKK2
20.1
stress.biotic
2
putative disease resistance protein
AT2G32210
Q9SKX9
35.2
not assigned.unknown
2.3
unknown protein ;supported by full-length cDNA: Ceres:31665.
AT2G32190
Q9SKY1
35.2
not assigned.unknown
2.2
unknown protein ; supported by full-length cDNA: Ceres: 40344.
AT2G32240
F4ISU2
35.2
not assigned.unknown
2.9
putative myosin heavy chain ; supported by cDNA: gi_15982766_gb_AY057490.1_
AT2G03540
#N/A
35.2
not assigned.unknown
4
hypothetical protein predicted by genscan
AT2G03530
Q9ZQ89
29.5.11.4.3.2
protein.degradation.ubiquitin.E3.SCF.FBOX
2.4
putative integral membrane protein
AT2G32140
Q9SKY6
20.1.2
stress.biotic.receptors
2.2
putative disease resistance protein