Species & Dataset

Experiment

Foliar ozone injury

Arabidopsis thaliana
Common name: Thale cress, Mouse-ear cress
Family: Brassicaceae

Cultivar: C24 (Ozone tolerant), Te (Ozone sensitive), CT101, Col-0
Tissue: Rosettes
Ozone concentration: 350 nL L-1
Ozone exposure: 2 hours
Platform: Microarray
Year of study: 2014
Location: Helsinki, Finland

Title: Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana.

Summary: As multifaceted molecules, reactive oxygen species (ROS) are known to accumulate in response to various stresses. Ozone (O3) is an air pollutant with detrimental effect on plants and O3 can also be used as a tool to study the role of ROS in signaling. Genetic variation of O3 sensitivity in different Arabidopsis accessions highlights the complex genetic architecture of plant responses to ROS. To investigate the genetic basis of O3 sensitivity, a recombinant inbred line (RIL) population between two Arabidopsis accessions with distinct O3 sensitivity, C24 (O3 tolerant) and Te (O3 sensitive) was used for quantitative trait loci (QTL) mapping. Through analysis of QTL mapping combined with transcriptome changes in response to O3, we identified three causal QTLs and several potential candidate genes regulating the response to O3. Based on gene expression data, water loss, and stomatal conductance measurement, we found that a combination of relatively low stomatal conductance and constitutive activation of salicylic acid (SA)-mediated defense signaling were responsible for the O3 tolerance in C24. Application of exogenous SA prior to O3 exposure can mimic the constitutive SA signaling in C24 and could attenuate O3-induced leaf damage in the sensitive Arabidopsis accessions Te and Cvi-0.

Data repository: Gene Expression Omnibus (http://www.ncbi.nlm.nih.gov/geo/) (Accession number GSE61542)

Reference: Xu, E., Vaahtera, L., Hõrak, H., Hincha, D.K., Heyer, A.G. and Brosché, M., 2015. Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in A rabidopsis thaliana. Plant, cell & environment, 38(7), pp.1418-1433.

C24:

AGI Gene code	Uniprot Id	Bin Code	Bin Name	FoldChange	log2 FC	p-value	FDR adjusted p-value	Functional annotation
AT4G04500	Q9XEC7	30.2.17	signalling.receptor kinases.DUF 26	25.65943	4.68142	0	0	Encodes a cysteine-rich receptor-like protein kinase.
AT2G29740	O82382	16.8.3	secondary metabolism.flavonoids.dihydroflavonols	25.68296	4.68274	0	0.00002	UDP-glucosyl transferase 71C1 (UGT71C1); FUNCTIONS IN: quercetin 3'-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C2 (TAIR:AT2G29740.1); Has 7500 Blast hits to 7461 proteins in 403 species: Archae - 0; Bacteria - 348; Metazoa - 2171; Fungi - 25; Plants - 4881; Viruses - 17; Other Eukaryotes - 58 (source: NCBI BLink).
AT5G02780	Q6NLB0	26.9	misc.glutathione S transferases	25.70459	4.68395	0.0001	0.00126	hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med4 (InterPro:IPR019258); Has 258 Blast hits to 243 proteins in 75 species: Archae - 0; Bacteria - 23; Metazoa - 102; Fungi - 36; Plants - 37; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
AT3G01830	Q9SGI8	30.3	signalling.calcium	25.78773	4.68861	0	0	member of WRKY Transcription Factor; Group I
AT2G45760	Q58FX0	35.1	not assigned.no ontology	25.87459	4.69346	0.00009	0.00117	U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT3G49060.1); Has 126911 Blast hits to 124541 proteins in 4743 species: Archae - 223; Bacteria - 14733; Metazoa - 47002; Fungi - 10910; Plants - 34737; Viruses - 429; Other Eukaryotes - 18877 (source: NCBI BLink).
AT1G27890	Q9C6M9	27.1.19	RNA.processing.ribonucleases	25.9103	4.69545	0.02077	0.08752	Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.
AT1G42980	Q9C7S1	35.1.20	not assigned.no ontology.formin homology 2 domain-containing protein	25.97282	4.69893	0.00082	0.00662	bZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. bZIP60 mRNA is upregulated by the addition of ER stress inducers, tunicamycin (inhibitor of N-linked glycosylation), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress, bZIP60 mRNA is spliced by IRE1A and IRE1B to produce bZIP60-S, an active transcription factor without the transmembrane domain. bZIP60-U, a product of unspliced form of bZIP60 mRNA, is localized at the ER membrane and bZIP60-S is localized in the nucleus.
AT1G59865	F4ID47	35.2	not assigned.unknown	26.24322	4.71387	0.00001	0.00014	ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid?dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.
AT1G08860	Q5XQC7	30.3	signalling.calcium	26.36749	4.72069	0	0	Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.
AT4G11480	Q9LDS6	30.2.17	signalling.receptor kinases.DUF 26	26.47875	4.72676	0.00677	0.03642	Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
AT5G46080	Q9FNL4	30.2.99	signalling.receptor kinases.misc	26.50941	4.72843	0	0.00005	RNA-binding protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT3G19090.1); Has 1603 Blast hits to 1601 proteins in 212 species: Archae - 0; Bacteria - 4; Metazoa - 875; Fungi - 249; Plants - 311; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
AT4G08555	Q8GWL6	35.2	not assigned.unknown	26.55719	4.73103	0.00001	0.00025	Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: vacuole; EXPRESSED IN: embryo, hypocotyl, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G08770.1); Has 4369 Blast hits to 4341 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 39; Plants - 4275; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).

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CT101:

AGI Gene code	Uniprot ID	Bin Code	Bin Name	FoldChange	log2FC	p-value	FDR adjusted p-value	Functional annotation
AT1G75830	P30224	20.1	stress.biotic	Inf	Inf	0	0	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
AT4G19360	Q8L7G2	35.2	not assigned.unknown	Inf	Inf	0.0001	0.0004	Uncharacterised protein family (UPF0114); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT5G13720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G12210	Q9STJ0	29.5.11.4.2	protein.degradation.ubiquitin.E3.RING	Inf	Inf	0.0186	0.0479	UDP-D-glucuronate 4-epimerase
AT5G15254	#N/A	35.2	not assigned.unknown	Inf	Inf	0.0293	0.071	U-box domain-containing protein; FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin-ubiquitin ligase activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin conjugation factor E4, core (InterPro:IPR019474), U box domain (InterPro:IPR003613); Has 1036 Blast hits to 1011 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 218; Plants - 177; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
AT3G56700	B9TSP7	33.99	development.unspecified	Inf	Inf	0.0003	0.0012	Ubiquitin-associated (UBA) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G41160.1); Has 305 Blast hits to 304 proteins in 119 species: Archae - 6; Bacteria - 5; Metazoa - 77; Fungi - 99; Plants - 90; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
AT5G29075	#N/A	28.1.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase.gypsy-like retrotransposon	Inf	Inf	0.0064	0.0188	Ubiquitin system component Cue protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1).
AT1G36605	#N/A	28.1.1.3	DNA.synthesis/chromatin structure.retrotransposon/transposase.copia-like retrotransposon	Inf	Inf	0.0316	0.0758	transposable element gene; gypsy-like retrotransposon family, has a 9.1e-283 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
AT1G17180	Q9SHH7	26.9	misc.glutathione S transferases	197.3997	7.625	0	0	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
AT2G32200	Q1PEX8	35.2	not assigned.unknown	198.8101	7.6352	0	0	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32190.1); Has 214 Blast hits to 214 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
AT2G22880	O81005	35.1	not assigned.no ontology	199.7791	7.6423	0	0	Encodes a putative auto-regulated Ca2+-ATPase located in the plasma membrane involved in transporting Ca2+ outside developing pollen grains. This activity is important to support normal pollen development, particularly the progression to uninucleated microspores to bicellular pollen grains.
AT5G64905	Q8LAX3	20.1.3	stress.biotic.signalling	200.4838	7.6473	0	0	RAB GTPase homolog H1A (RABH1a); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Ras (InterPro:IPR013753), Rab6-related (InterPro:IPR015600), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1).
AT4G03950	O81514	34.8	transport.metabolite transporters at the envelope membrane	201.5295	7.6548	0	0	malonyl-CoA decarboxylase family protein; FUNCTIONS IN: malonyl-CoA decarboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malonyl-CoA decarboxylase (InterPro:IPR007956); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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Te:

AGI Gene code	Uniprot ID	Bin Code	Bin Name	p-value	FDR adjusted p-value	Functional annotation
AT1G76470	F4I2E5	16.2	secondary metabolism.phenylpropanoids	1.27E-76	2.60E-74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
AT3G14225	Q9LJP1	26.28	misc.GDSL-motif lipase	0.001965841	0.00583628	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
AT1G76430	Q9S735	34.7	transport.phosphate	0.033724302	0.074608607	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits to 177 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
AT1G09090	Q9SBI0	20.1.1	stress.biotic.respiratory burst	0.035139805	0.077306949	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16575.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
AT2G07660	Q9XE44	28.1.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase.gypsy-like retrotransposon	0.037798986	0.082370263	Ubiquitin-associated (UBA) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G41160.1); Has 305 Blast hits to 304 proteins in 119 species: Archae - 6; Bacteria - 5; Metazoa - 77; Fungi - 99; Plants - 90; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
AT1G42980	Q9C7S1	35.1.20	not assigned.no ontology.formin homology 2 domain-containing protein	6.09E-05	0.000236663	transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11710.1); similar to hypothetical protein 23.t00046 [Brassica oleracea] (GB:ABD65629.1); contains domain REVERSE TRANSCRIPTASES (PTHR19446); contains domain gb def: Hypothetical protein At2g15600 (PTHR19446:SF12)
AT2G01028	#N/A	28.1.1.1	DNA.synthesis/chromatin structure.retrotransposon/transposase.gypsy-like retrotransposon	0.003712113	0.010387734	transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G12505.1); contains domain no description (G3D.3.50.60.10); contains domain Clavaminate synthase-like (SSF51197)
AT1G75830	P30224	20.1	stress.biotic	2.53E-07	1.37E-06	Transmembrane proteins 14C; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT1G50740.1); Has 449 Blast hits to 449 proteins in 111 species: Archae - 0; Bacteria - 35; Metazoa - 208; Fungi - 10; Plants - 185; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
AT2G06470	Q9SKI8	28.1	DNA.synthesis/chromatin structure	0.000483151	0.001609853	Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G40240.1); Has 15146 Blast hits to 5016 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 20; Plants - 14896; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink).
AT1G06135	Q8LCX3	35.2	not assigned.unknown	4.09E-10	2.97E-09	Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide repeat 336 (TAIR:AT1G61870.1); Has 27426 Blast hits to 8035 proteins in 245 species: Archae - 4; Bacteria - 14; Metazoa - 220; Fungi - 290; Plants - 26279; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink).
AT2G31345	Q8L9Z1	35.2	not assigned.unknown	0.000144817	0.000528546	SWIB/MDM2 domain superfamily protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT2G35605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
AT1G68450	Q9CA36	35.1	not assigned.no ontology	0.023224955	0.053617442	Signal peptidase subunit; FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal peptidase 22kDa subunit (InterPro:IPR007653); BEST Arabidopsis thaliana protein match is: Signal peptidase subunit (TAIR:AT5G27430.1); Has 426 Blast hits to 426 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 138; Plants - 78; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).

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